PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G246300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GeBP
Protein Properties Length: 450aa    MW: 50517.7 Da    PI: 4.3176
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G246300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573117.29e-37156255297
             DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkif 89 
                        lfqrlw++eDei lLqG++++++++g      +++d+  fy+++k++++++++k+qlveK+rrLKkKf++ +++++sgk+++f+++hdq +f
  Aqcoe2G246300.1.p 156 LFQRLWTDEDEIGLLQGFLEYTSQRGGfknsAYHHDTAPFYDQIKSKLQLDFNKNQLVEKLRRLKKKFRNVMSRINSGKDFNFKTPHDQATF 247
                        79***********************9777756677********************************************************* PP

             DUF573  90 elskkiWg 97 
                        e+s+kiW 
  Aqcoe2G246300.1.p 248 EISRKIWS 255
                        *******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.5E-34157255IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MTSNEEEEDH TITTINNNNT TTTTDILIDD EDLEEEDDDD DEEDLESEDD EDEDDDTHQP  60
LQQQEEEDED DDEQQPLLHS IPIIPTTNIP ITITPTITNS SSSPDHKRQR ITMSTTTSTT  120
TTSTIPIIPT TVSVPITTPI HEEEKKPLAF DDSRRLFQRL WTDEDEIGLL QGFLEYTSQR  180
GGFKNSAYHH DTAPFYDQIK SKLQLDFNKN QLVEKLRRLK KKFRNVMSRI NSGKDFNFKT  240
PHDQATFEIS RKIWSGIDGI AAETGIIDDD DQGNNTNPSP LLLHNSNTPS AVEINGTHFE  300
KKVSGSSSRS RKRSRNRASV AGIAAATMVA EENVSDPTNL LNCPVNSSIP SVIEETVRSC  360
LSPLFKEFMF SAINGPGNSR GFGGMGMNLL PMNFGGNMSM NLVGGEKEMM DEKWRKQQIL  420
ELEVYSKRVD LVQDQIKLAL EELRSMGSR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1311316KRSRNR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010271046.11e-110PREDICTED: probable transcription factor At3g04930
RefseqXP_010271047.11e-110PREDICTED: probable transcription factor At3g04930
TrEMBLA0A2G5EY700.0A0A2G5EY70_AQUCA; Uncharacterized protein
STRINGAquca_003_00290.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.15e-71DNA-binding storekeeper protein-related transcriptional regulator