PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G158200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 447aa    MW: 50425.5 Da    PI: 8.6615
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G158200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM150.57.9e-471052266128
                NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                        +F+Ptdeel+++yLk+k++g +++  evi+evdi+k+ePwdLp k++ ++++ew+fFs++ +ky++g++++rat+ g+Wkatgk++ v+s k
  Aqcoe2G158200.1.p 105 KFSPTDEELISHYLKRKINGLEISG-EVIAEVDICKFEPWDLPeKAIIQSDHEWFFFSPNGRKYPNGSQAKRATEVGFWKATGKERVVKS-K 194
                        8***********************9.99***************667777899*********************************99999.8 PP

                NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++++g+k+tLvf+ grapkg++tdW+mhey +
  Aqcoe2G158200.1.p 195 KSVIGTKRTLVFHLGRAPKGSRTDWIMHEYCM 226
                        999***************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100550.87100246IPR003441NAC domain
SuperFamilySSF1019411.31E-51105246IPR003441NAC domain
PfamPF023653.0E-23105225IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MPGSSPISVQ KFDNEIGSCW NSDFKAKILW MLGSKKEYLK FLDFEEVNRL SQLIKILQSV  60
RFIQFILYIR DSSVCCIQRS TDKGWSDELS QAKTQYIALM TTENKFSPTD EELISHYLKR  120
KINGLEISGE VIAEVDICKF EPWDLPEKAI IQSDHEWFFF SPNGRKYPNG SQAKRATEVG  180
FWKATGKERV VKSKKSVIGT KRTLVFHLGR APKGSRTDWI MHEYCMKEKK DDKAQDSLVI  240
CRLRKKQDFT NKNDNSSSDS VGNIGLSTES SSRPASSKVG GDLHKLEETG ALGLGMDGNV  300
KSAEDDCFAD ILKDDIVKLD ANSDYQSFLL PKIAENSAVC TSTKPVNSST SRVDNFQGTA  360
NRRIRLEKYG ARRKHVELLP PVSDENSSER VVINGEANQS IASRRVNLFQ MFSGWVLCTM  420
FVLMVVFLLF YLHVLQRTSC HSLTVA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-4410525222171NO APICAL MERISTEM PROTEIN
1ut4_B1e-4410525222171NO APICAL MERISTEM PROTEIN
1ut7_A1e-4410525222171NO APICAL MERISTEM PROTEIN
1ut7_B1e-4410525222171NO APICAL MERISTEM PROTEIN
3swm_A1e-4410525225174NAC domain-containing protein 19
3swm_B1e-4410525225174NAC domain-containing protein 19
3swm_C1e-4410525225174NAC domain-containing protein 19
3swm_D1e-4410525225174NAC domain-containing protein 19
3swp_A1e-4410525225174NAC domain-containing protein 19
3swp_B1e-4410525225174NAC domain-containing protein 19
3swp_C1e-4410525225174NAC domain-containing protein 19
3swp_D1e-4410525225174NAC domain-containing protein 19
4dul_A1e-4410525222171NAC domain-containing protein 19
4dul_B1e-4410525222171NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002272914.27e-88PREDICTED: NAC domain-containing protein 40 isoform X1
TrEMBLA0A200Q9M64e-96A0A200Q9M6_9MAGN; NAC domain
STRINGVIT_06s0080g00970.t013e-87(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44290.14e-72NAC domain containing protein 60