PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G147900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Dof
Protein Properties Length: 329aa    MW: 35771 Da    PI: 9.2506
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G147900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof120.36.9e-3866125362
             zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                        e alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+
  Aqcoe2G147900.1.p  66 EIALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSK 125
                        6689*****************************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-3349118IPR003851Zinc finger, Dof-type
PfamPF027012.3E-3268123IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.29269123IPR003851Zinc finger, Dof-type
PROSITE patternPS01361071107IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009640Biological Processphotomorphogenesis
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MVFTSLPPYI DSTNWHQQPN HQPRSNSENM QLQPPPPQSS MGVSTGSIRP GSMTDRARLA  60
KLPQPEIALK CPRCESTNTK FCYFNNYSLS QPRHFCKTCR RYWTRGGALR SVPVGGGCRR  120
NKRSKGSNSK SPVSSERPMG STNSTSTLPS NSFNTDAISH MQPQSLPQFP FMTSLHHLTD  180
YGGGNMGLNF GAIQPPVLPT CSTGSVSDMD FQIRGSTGDT GTISNGSTQQ WRSLQQFPFL  240
AGLEPQTGLY PLEGESTEAP SYIMEGGRLP GKPSASVITQ LASVKMEENR GLNLSRQFLG  300
MPGNDQYWGA GNAWTDLSGF TTTSTNIN*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00407DAPTransfer from AT3G55370Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010253200.11e-126PREDICTED: dof zinc finger protein DOF3.6
TrEMBLA0A2G5EWV00.0A0A2G5EWV0_AQUCA; Uncharacterized protein
STRINGAquca_003_00022.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.11e-51OBF-binding protein 3