PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe2G141600.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | bZIP | ||||||||
Protein Properties | Length: 430aa MW: 47890.7 Da PI: 7.6807 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.6 | 8.3e-11 | 120 | 161 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L Aqcoe2G141600.2.p 120 AKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLSQLEQDL 161 6889*************************9888887777666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.7E-8 | 117 | 193 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.3E-8 | 118 | 163 | No hit | No description |
PROSITE profile | PS50217 | 9.151 | 119 | 163 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.2E-8 | 120 | 162 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.81E-7 | 121 | 163 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 124 | 139 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.2E-31 | 201 | 276 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 430 aa Download sequence Send to blast |
MFPSWPIRFQ QTPRGSSKSG EDSTDSGSAQ NNNLSSYKAD TQFEPESPIS KKASNQNLDH 60 KQLQQQQQLV EMASDTLRAG TGTGTGVGGG PPPQVQNQHQ TKPLEKRKGA GSTSDKPLDA 120 KTLRRLAQNR EAARKSRLRK KAYVQQLETS RIKLSQLEQD LQRARSQGLF LAGGGAGGSL 180 SSDAAIFDME YARWLEDDHR HMSELRTALQ AHLSDGDLRM ITDGYLSHYD EIFRLKGIAA 240 KSDVFHLITG MWITPAERCF LWMGGFRPSE LIKILMPQLD PLTEQQLMGI CNLQQSSQQA 300 EDALSQGLEQ LHQSLADTIA TGSLCDGSNV DDYMGQMALA LGKLSNLEGF VHQADNLRQQ 360 TLHQLRRILT VRQAARCFLA IGEYYNRLRA LSSLWASRPR EHMISDDNSC QTTSDLQMVQ 420 HQQSHFSNY* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001289788.1 | 0.0 | transcription factor TGA2 | ||||
Refseq | XP_010244798.1 | 0.0 | PREDICTED: transcription factor TGA2 isoform X1 | ||||
Refseq | XP_010244803.1 | 0.0 | PREDICTED: transcription factor TGA2 isoform X1 | ||||
Swissprot | Q93XM6 | 0.0 | TGA9_ARATH; Transcription factor TGA9 | ||||
TrEMBL | A0A2G5ETI2 | 0.0 | A0A2G5ETI2_AQUCA; Uncharacterized protein (Fragment) | ||||
STRING | Aquca_004_00127.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 1e-171 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe2G141600.2.p |
Publications ? help Back to Top | |||
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