PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe2G038800.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | HB-other | ||||||||
Protein Properties | Length: 496aa MW: 55519.2 Da PI: 8.5798 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61 | 1.9e-19 | 19 | 74 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kRt t+ q+e+Le+l+++++yp+++ + +LA+++gL+e+qV+ WF+ rR k+k+ Aqcoe2G038800.2.p 19 KKRTLKTPAQIEALENLYNEHKYPNEALKSQLAEEIGLSEKQVSGWFCHRRLKDKN 74 89***************************************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 4.8E-20 | 3 | 74 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 16.714 | 15 | 75 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 1.2E-17 | 17 | 84 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 2.3E-19 | 17 | 79 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 4.6E-17 | 19 | 73 | IPR001356 | Homeobox domain |
CDD | cd00086 | 8.68E-17 | 19 | 75 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 496 aa Download sequence Send to blast |
MEESSEVHEE DKGHAENSKK RTLKTPAQIE ALENLYNEHK YPNEALKSQL AEEIGLSEKQ 60 VSGWFCHRRL KDKNMLKDET YGIGRQDLSS GTIQDRCSAL KQDSCSSTKP GEYKYFEPRE 120 VESRRFCGQY SPTEDLNYRN RGQYMHARNY SAMENTSSGS SSASQERMHA HSKDPYDMEH 180 LRYSSQSRNY SLMNVEDLKP RRHMIGSEYL NSQDEIGNAA IMAVKRQLGR LYREDGPPLG 240 VKFESLPPSA FDAPIEDSTN GPYYVGDSVK QNSVGVLKVH NEPVLDTGHA QFSRGKHPHS 300 SYANGDLKRV RLDPNHHDSI SYQSLGKSSL ANCRSYGPGQ YSSVEKIDGN PAVVASNKSR 360 KHRIRPKHSV EGMESEYNVN HFPHSYKKKF TTSGSSNPRL HNSDGSGSQT LWTGSYLSGR 420 KSRENANLVG VKMQQTNKLR KKTKQSDGHM PLEYASKTPS PPALFSPENQ IKGYAGEIPT 480 SFSDDETAAT SSSVD* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010276612.1 | 1e-157 | PREDICTED: uncharacterized protein LOC104611309 | ||||
TrEMBL | A0A2G5DXB3 | 0.0 | A0A2G5DXB3_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_014_00610.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G03250.1 | 1e-60 | HB-other family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe2G038800.2.p |