PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G038800.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

HB-other

Protein Properties

Length: 496aa MW: 55519.2 Da PI: 8.5798

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G038800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61	1.9e-19	19	74	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kRt t+ q+e+Le+l+++++yp+++ + +LA+++gL+e+qV+ WF+ rR k+k+ Aqcoe2G038800.1.p 19 KKRTLKTPAQIEALENLYNEHKYPNEALKSQLAEEIGLSEKQVSGWFCHRRLKDKN 74 89***************************************************995 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.8E-20	3	74	IPR009057	Homeodomain-like
PROSITE profile	PS50071	16.714	15	75	IPR001356	Homeobox domain
SuperFamily	SSF46689	1.2E-17	17	84	IPR009057	Homeodomain-like
SMART	SM00389	2.3E-19	17	79	IPR001356	Homeobox domain
Pfam	PF00046	4.6E-17	19	73	IPR001356	Homeobox domain
CDD	cd00086	8.68E-17	19	75	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence Send to blast
MEESSEVHEE DKGHAENSKK RTLKTPAQIE ALENLYNEHK YPNEALKSQL AEEIGLSEKQ 60 VSGWFCHRRL KDKNMLKDET YGIGRQDLSS GTIQDRCSAL KQDSCSSTKP GEYKYFEPRE 120 VESRRFCGQY SPTEDLNYRN RGQYMHARNY SAMENTSSGS SSASQERMHA HSKDPYDMEH 180 LRYSSQSRNY SLMNVEDLKP RRHMIGSEYL NSQDEIGNAA IMAVKRQLGR LYREDGPPLG 240 VKFESLPPSA FDAPIEDSTN GPYYVGDSVK QNSVGVLKVH NEPVLDTGHA QFSRGKHPHS 300 SYANGDLKRV RLDPNHHDSI SYQSLGKSSL ANCRSYGPGQ YSSVEKIDGN PAVVASNKSR 360 KHRIRPKHSV EGMESEYNVN HFPHSYKKKF TTSGSSNPRL HNSDGSGSQT LWTGSYLSGR 420 KSRENANLVG VKMQQTNKLR KKTKQSDGHM PLEYASKTPS PPALFSPENQ IKGYAGEIPT 480 SFSDDETAAT SSSVD*

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence Send to blast

MEESSEVHEE DKGHAENSKK RTLKTPAQIE ALENLYNEHK YPNEALKSQL AEEIGLSEKQ  60
VSGWFCHRRL KDKNMLKDET YGIGRQDLSS GTIQDRCSAL KQDSCSSTKP GEYKYFEPRE  120
VESRRFCGQY SPTEDLNYRN RGQYMHARNY SAMENTSSGS SSASQERMHA HSKDPYDMEH  180
LRYSSQSRNY SLMNVEDLKP RRHMIGSEYL NSQDEIGNAA IMAVKRQLGR LYREDGPPLG  240
VKFESLPPSA FDAPIEDSTN GPYYVGDSVK QNSVGVLKVH NEPVLDTGHA QFSRGKHPHS  300
SYANGDLKRV RLDPNHHDSI SYQSLGKSSL ANCRSYGPGQ YSSVEKIDGN PAVVASNKSR  360
KHRIRPKHSV EGMESEYNVN HFPHSYKKKF TTSGSSNPRL HNSDGSGSQT LWTGSYLSGR  420
KSRENANLVG VKMQQTNKLR KKTKQSDGHM PLEYASKTPS PPALFSPENQ IKGYAGEIPT  480
SFSDDETAAT SSSVD*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010276612.1	1e-157	PREDICTED: uncharacterized protein LOC104611309
TrEMBL	A0A2G5DXB3	0.0	A0A2G5DXB3_AQUCA; Uncharacterized protein
STRING	Aquca_014_00610.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	1e-60	HB-other family protein

Link Out ? help Back to Top
Phytozome	Aqcoe2G038800.1.p