PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G017600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family MYB_related
Protein Properties Length: 351aa    MW: 39891.4 Da    PI: 5.003
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G017600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.74.8e-071148241
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS
    Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41
                       ++W + E +++++a +q G + W++ a+ ++  R  k++k
  Aqcoe2G017600.1.p 11 LPWEEHELKIFYEAYEQNGCK-WNLLASLLP-ERNKKMLK 48
                       58*****************99.*********.89888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.3957IPR001005SANT/Myb domain
SuperFamilySSF466894.19E-71055IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.4E-51251IPR009057Homeodomain-like
SuperFamilySSF466892.76E-8137190IPR009057Homeodomain-like
SMARTSM007171.4144192IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MSLISKWRKI LPWEEHELKI FYEAYEQNGC KWNLLASLLP ERNKKMLKML YKQNEDYLTF  60
PESKRRLIFF QEMVQYFQKN FVYVGDPGES VYVSEAEGCE VGSSDICSSD SKNLSSGDPE  120
KIVSWDPVLH MGSRRLSIIP KWKKIARWDR VELAVFYTAY QLIGCDWVKI ASFLPRRDVE  180
MVKMLYLNNT TYLKRSSYEG NLISFLVIVD MFQDKYVYGS DSGASEDSHN DDSEKAADVS  240
EAEFVYKEAD GTVQGKLEDA GNGLTKVGNS GLESGKVCLF DFEEGAVERK NVLVSVFLGD  300
KVFWQKKFVS VSVKVCEFDS GTEVDRVKVG ISACGMVFGD SDSHKVVNRE *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DY840.0A0A2G5DY84_AQUCA; Uncharacterized protein
STRINGAquca_014_00795.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21430.21e-07DNA binding