PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe1G497500.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | NF-YC | ||||||||
Protein Properties | Length: 187aa MW: 21342.6 Da PI: 4.4223 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 33.9 | 6.6e-11 | 91 | 172 | 18 | 99 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 +P ri++i++++ +i+ ea l+ ka e f + + + + +r++++ i++av++ + +dfl d vp++ Aqcoe1G497500.1.p 91 SCVFPTNRINRIIRSEGTDFRITQEAIFLVNKATEQFFDLFCEDVYANVAQEHRKAVEYKHISSAVSKGKRYDFLSDFVPEK 172 5679*************999*****************866677789999999***************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47113 | 5.59E-15 | 66 | 165 | IPR009072 | Histone-fold |
Gene3D | G3DSA:1.10.20.10 | 1.9E-18 | 94 | 171 | IPR009072 | Histone-fold |
Pfam | PF00808 | 1.4E-12 | 94 | 156 | IPR003958 | Transcription factor CBF/NF-Y/archaeal histone domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MVMKKKNTNT TEDVLVISSS SSSASEEEEE EVEEESEEEE EEVKSSNNSN QQDIEEIMEI 60 DEDNSMKNKN KMKMKQKNKA VHVTTDNVTG SCVFPTNRIN RIIRSEGTDF RITQEAIFLV 120 NKATEQFFDL FCEDVYANVA QEHRKAVEYK HISSAVSKGK RYDFLSDFVP EKIRVEDALS 180 ERLPGI* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010264713.1 | 2e-40 | PREDICTED: uncharacterized protein LOC104602644 | ||||
TrEMBL | A0A2G5D4X2 | 1e-131 | A0A2G5D4X2_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_027_00046.1 | 1e-132 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07980.1 | 9e-28 | nuclear factor Y, subunit C10 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe1G497500.1.p |