PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G489800.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Dof

Protein Properties

Length: 305aa MW: 33222.6 Da PI: 6.9144

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G489800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.6	1.5e-39	35	95	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprCdstntkfCyynnyslsqPryfCk+C+ryWt+GG+lrnvPvGgg+rkn+k+s Aqcoe1G489800.1.p 35 QEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKGCKRYWTQGGTLRNVPVGGGCRKNNKRS 95 7899*****************************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	9.0E-29	24	93	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.9E-33	37	93	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.087	39	93	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	41	77	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005730	Cellular Component	nucleolus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence Send to blast
MDLSSAPHQA MVVHSLEDVL AGPKPQQDKK VRPQQEQALK CPRCDSTNTK FCYYNNYSLS 60 QPRYFCKGCK RYWTQGGTLR NVPVGGGCRK NNKRSSSSSS SSSKRTQDQV LITTNSNQIP 120 TLPLLTYDSN DLTLAFARLH NNQPTMQLGL NDHDLSLFGN STSTNHCDIL GNQNTTFTNN 180 TSNNTTSTFL DALKSGFLDN DQGGSHSIYN NGYGNEDLGE VLSGSAGGEE VVVLPCDEMS 240 GSTIMTTTKQ EFCRGRDGEN RVLMNFPWQI GGDHQANIGG VDSGRGYWNG LGSSWHGVVN 300 SPLM*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010244980.1	1e-130	PREDICTED: dof zinc finger protein DOF3.2-like
TrEMBL	A0A2G5D581	0.0	A0A2G5D581_AQUCA; Uncharacterized protein
STRING	Aquca_027_00116.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28510.1	5e-43	Dof family protein

Link Out ? help Back to Top
Phytozome	Aqcoe1G489800.1.p