PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Aqcoe1G464100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
|
||||||||
Family | Dof | ||||||||
Protein Properties | Length: 341aa MW: 36537.5 Da PI: 9.2015 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.8 | 2.9e-39 | 73 | 133 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ Aqcoe1G464100.1.p 73 PEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 133 67899*****************************************************987 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 3.0E-34 | 57 | 126 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 7.5E-33 | 76 | 131 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.609 | 77 | 131 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 79 | 115 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 341 aa Download sequence Send to blast |
MVFPPVPVYL DPPNWQQQTN YQQGSTSDNP QHHHQQQLPP QQLLPPAGGS GTTGSIRPGS 60 MADRARMAKV PQPEAALKCP RCESTNTKFC YFNNYSLSQP RHFCKTCRRY WTRGGALRNV 120 PVGGGCRRNK RSKSSSSKSP SIGDRQSGPG STSSVPSNSS NSDILGHMQH QQPQQFPFMP 180 SLHHLSDYGA ADMGLNFGGI QSQMVAQTGG GSRSDMDFQV GGNSVGGNNI LSSGGPEQWR 240 LQQFPFLAGL EQQSSGLYPF EGDSAQHAPY GGAAGQLRAR APSSMAMQGQ FTPVKMEDSN 300 QGLNLSRQFL GIPGNDQYLG GGNAWTDLSG FTSSSAGHML * |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010253200.1 | 1e-136 | PREDICTED: dof zinc finger protein DOF3.6 | ||||
TrEMBL | A0A2G5D6E2 | 0.0 | A0A2G5D6E2_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_027_00331.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G55370.2 | 1e-51 | OBF-binding protein 3 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Aqcoe1G464100.1.p |