PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G457300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 462aa    MW: 52430.6 Da    PI: 4.506
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G457300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.37.6e-20161441128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksgyWkatg 87 
                        +ppGf+F Ptd+el+++yL+kk++g++   + vi e  +y     ePw++ +  ++ ++ +yf++  +kk+   +++   r+  +g Wk   
  Aqcoe1G457300.1.p  16 VPPGFQFCPTDHELLTYYLTKKLRGDEDLPKGVIGERTLYGKeapEPWKIFEGRTKVDEVIYFYTWVNKKHVgsNNNYYDRVCGEGKWKI-D 106
                        69************************9656689**99999764458****633233345669999888877644677788999*****95.5 PP

                NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        k+ e+ +++++l g kk + f    a k +  +W+++ey+l
  Aqcoe1G457300.1.p 107 KTYEISDSQNRLLGFKKKFNFD---ADKNKYGSWILEEYTL 144
                        77999999*************8...4444568*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-2313160IPR003441NAC domain
PROSITE profilePS5100525.59216163IPR003441NAC domain
PfamPF023651.1E-1317144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MCKDIVREQE EAVLVVPPGF QFCPTDHELL TYYLTKKLRG DEDLPKGVIG ERTLYGKEAP  60
EPWKIFEGRT KVDEVIYFYT WVNKKHVGSN NNYYDRVCGE GKWKIDKTYE ISDSQNRLLG  120
FKKKFNFDAD KNKYGSWILE EYTLNIPNPN NQQELAVCMM HRGRIIKMSE DKYNNDQFMN  180
NMPCSKKRTR IVNKSEPAGS TKMLKQTKES VPAASTPQPP LVIEEQPMLA PYGGLIFPTF  240
EGTTAELTFG LDLTQQDHHD NCLWMSHPES QPQPPSQPCI TDSYDSLLQQ EWAQPSWPPA  300
ILKHNYDCVL TSTPVVQERP TVQSSVSSPD NNYSCMSATL DRERTTLTTK FNMGGPTINS  360
PIQTDDNHPQ PDQGVPAACP QPDANQRYGV QTQSYDQPQP DNVLAARSQP DVDQCAYGVE  420
DLSYLDTPEF WSECADFIGD NVDAVQEEDD LYKLFGNFPE I*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-1251443140Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5E0X00.0A0A2G5E0X0_AQUCA; Uncharacterized protein
STRINGAquca_013_00314.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.22e-11NAC family protein