PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G456700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Trihelix
Protein Properties Length: 485aa    MW: 55234.9 Da    PI: 5.8059
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G456700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix35.33e-11123159137
           trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskk 37 
                        rW++qe+l+L+e+r++++++++++++k+plW+e+s+ 
  Aqcoe1G456700.1.p 123 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEISSE 159
                        8**********************************85 PP
2trihelix61.91.5e-19332418186
           trihelix   1 rWtkqevlaLiearremeerlrrgk.lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                        +W+++ +  Li +r+++e+++++++ +k++lWee+s+km+  g+ rs+k C+ekwe+++++ +  k   +k+++e+  t ++f++l+
  Aqcoe1G456700.1.p 332 KWPESDISSLIHLRTSLESTFQQNEySKETLWEEISAKMACLGYDRSAKSCEEKWEDISNYIRSSKLECSKKRNENCITSSHFQHLD 418
                        7*********************976599*************************************9998888888888999999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500903.938116157IPR017877Myb-like domain
PfamPF138377.7E-14331419No hitNo description
PROSITE profilePS500906.446332390IPR017877Myb-like domain
CDDcd122032.63E-21332397No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0010200Biological Processresponse to chitin
GO:0046621Biological Processnegative regulation of organ growth
GO:0048442Biological Processsepal development
GO:0048498Biological Processestablishment of petal orientation
GO:0090428Biological Processperianth development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MEMNDHHQYG LPDLRHLLAG RTHFPNFPQQ YQTHRNLTNT PHYDFSMLSS SQVVHDTPHV  60
NFSADSTTTT TNNSTSPTNN NTITTTTPPL TTTTTTTTTT TNSLCGGFEN MEGCFGADGG  120
NGRWPRQETL TLLEIRSRLD SKFKEANQKG PLWDEISSES LSISNSSFFD TSSSEDGDND  180
GTAMAFMENY SMDKKNKMVM KDIQSSKRGR KSWKAKIRDF VDSHMKKLME TQEVWLEKML  240
KTLEQKEKER MLREEEWRKR EAARIDQEHK FWANERAWFE ARDSALMEAL RKITGKELKT  300
SSFKELMGAD HPENMENNGS ETLESTVNST DKWPESDISS LIHLRTSLES TFQQNEYSKE  360
TLWEEISAKM ACLGYDRSAK SCEEKWEDIS NYIRSSKLEC SKKRNENCIT SSHFQHLDSN  420
YNQGGVFYGH GHEAIGIHSI SDGPSHCNSN VGTTVSDSGF RFLMGEGENL WENYGVNITR  480
GENH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022743398.11e-113trihelix transcription factor PTL-like
TrEMBLA0A2G5D6N90.0A0A2G5D6N9_AQUCA; Uncharacterized protein
STRINGAquca_027_00387.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.12e-52Trihelix family protein