PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe1G374800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | G2-like | ||||||||
Protein Properties | Length: 135aa MW: 15808.1 Da PI: 10.0984 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 38.5 | 2.5e-12 | 67 | 90 | 1 | 24 |
G2-like 1 kprlrWtpeLHerFveaveqLGGs 24 kprlrWt++LHerFveav qLGG+ Aqcoe1G374800.1.p 67 KPRLRWTNDLHERFVEAVMQLGGP 90 79*********************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.7E-10 | 64 | 91 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.3E-8 | 67 | 90 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence Send to blast |
MYSGRKSNLL EQVQPHHPHH DHLLHQQQLY QHEQEMEEAM MLNNNHNKQK ERGVREPLSV 60 LLTSDAKPRL RWTNDLHERF VEAVMQLGGP ITIEFTHVDV LIGKAPPLKI RERGGPRKID 120 KRSKQNMTYQ RNLL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2G5ERU4 | 3e-94 | A0A2G5ERU4_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_005_00363.1 | 5e-95 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13640.2 | 4e-12 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe1G374800.1.p |