PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G361100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family FAR1
Protein Properties Length: 439aa    MW: 50934.5 Da    PI: 9.6741
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G361100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1613.5e-1923112291
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                        fYneYAk  GFsvrk++++    +g++ +r+f Cs+   re++ ++ ++++++ r  tr++C a l++  ++  + w v  + ++HnH lap
  Aqcoe1G361100.1.p  23 FYNEYAKFKGFSVRKDHKTVV--DGRTRRRRFICSCASVRERKWTNlHKRRKKARRLTRCNCPAALNIVYDDeLNMWTVRGFMSQHNHVLAP 112
                        9***************97776..999***************99998677788899*************9999899*************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.1E-1623112IPR004330FAR1 DNA binding domain
PfamPF105513.6E-35233327IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    Send to blast
MGEISDEDML RARFNTDEDA YFFYNEYAKF KGFSVRKDHK TVVDGRTRRR RFICSCASVR  60
ERKWTNLHKR RKKARRLTRC NCPAALNIVY DDELNMWTVR GFMSQHNHVL APSGGSHFLR  120
SHRKVSLSNA VLAQNLYALG VSKKLVMDII ISKSGSHAAA GCTARDLYNQ MNRARVERII  180
DGDANLVNSF LEDMNVRDPG FFKKIQVNEK KQLTKLFWSD SQSQEDYKLF GDVLMFDSTY  240
RTNRYDMPLV VFAGVNNHRH TVIYALALMN NETIDSYEWA LKTFLAAMDG IALKSVITDG  300
DAAIRNAIEN VFPKSKHRLC VWHVVQNAIT NVWTDGFVKG FVEAMFCKGP PDAFEKKWAE  360
LLIEYKTVAE QKWVHNIYEK KEMWAEAYLR EYFFAGCRSN QRCESINSVV RVCVKSGLSL  420
IELVDKLLQK IRHIRYRDF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16176RKWTNLHKRRKKARRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5CKR50.0A0A2G5CKR5_AQUCA; Uncharacterized protein
STRINGAquca_047_00016.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-76FAR1-related sequence 5