PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe1G317200.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | Dof | ||||||||
Protein Properties | Length: 228aa MW: 25330.1 Da PI: 5.3543 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 106.1 | 1.8e-33 | 26 | 82 | 2 | 58 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrkn 58 ke l+cp Cds+ntkfCy+nny+ sqPry+Ck+C+ryWtkGG lrnvP+Gg rr++ Aqcoe1G317200.1.p 26 KEPLLNCPWCDSMNTKFCYFNNYNRSQPRYYCKSCKRYWTKGGNLRNVPIGGNRRNK 82 567789*********************************************999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-20 | 25 | 82 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 6.0E-30 | 29 | 82 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 26.021 | 30 | 84 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 32 | 68 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence Send to blast |
MGLNSKQFSN KRDDLKLKKE DQNQQKEPLL NCPWCDSMNT KFCYFNNYNR SQPRYYCKSC 60 KRYWTKGGNL RNVPIGGNRR NKPLKTINSN SSSIGFEENG LLSNGVAEKL NVLSGSLGNG 120 VSDSSPLSLP FSLPNLDFTN LTSFETTPSA ISPSSAHLDG EIQGCRGGID GSVEDPCSSS 180 TSTFVEIKPS LQLSSSNSFM DSWSWDDFNT IIFTDMNQTW EYFEGKD* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2G5CH95 | 1e-165 | A0A2G5CH95_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_054_00034.1 | 1e-166 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38000.1 | 7e-28 | DNA binding with one finger 4.7 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe1G317200.1.p |