PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Aqcoe1G258100.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
|
||||||||
Family | Dof | ||||||||
Protein Properties | Length: 354aa MW: 38949.5 Da PI: 9.375 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 118.6 | 2.4e-37 | 51 | 110 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++ +kcprCds ntkfCyynnys sqPr+fCk+CrryWt+GG+lrnvPvGgg+rk k+ Aqcoe1G258100.2.p 51 PQQPQKCPRCDSLNTKFCYYNNYSQSQPRFFCKTCRRYWTQGGTLRNVPVGGGCRKGKRL 110 67899***************************************************9986 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 2.2E-32 | 53 | 109 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.127 | 55 | 109 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 3.0E-18 | 56 | 100 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 57 | 93 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 354 aa Download sequence Send to blast |
MEQDRKGGGG RRGVDEMREI QQQHQQQQQK DHQRGGTKQQ NQENNQHHPP PQQPQKCPRC 60 DSLNTKFCYY NNYSQSQPRF FCKTCRRYWT QGGTLRNVPV GGGCRKGKRL KRSSSSPENL 120 NSSTSHSNSI LSIPSVAPPL RNKGIDGILP SSSPLLPIAA TAVPPSMYYP GGGFFSSLAG 180 FPSFNHQPPI NVGGEFGSSN LALLQGFSLP FHTQQQMHHQ QQLHHQQQQQ QQHQQQQLYL 240 HQPHNFNLGL SSDDGLEEKV VVQPNKPSTS HQEWSQSFNP ATNNSSSNSE AAAAGYWSSS 300 NNNNNTNTST INTSTTSTSV SLNPTHWTDH LSGYGPPPPP PTSTTSSSSP SFL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010260261.1 | 8e-62 | PREDICTED: dof zinc finger protein DOF5.4-like | ||||
Refseq | XP_010260262.1 | 8e-62 | PREDICTED: dof zinc finger protein DOF5.4-like | ||||
Refseq | XP_010260263.1 | 8e-62 | PREDICTED: dof zinc finger protein DOF5.4-like | ||||
Refseq | XP_010260264.1 | 8e-62 | PREDICTED: dof zinc finger protein DOF5.4-like | ||||
Refseq | XP_010260265.1 | 8e-62 | PREDICTED: dof zinc finger protein DOF5.4-like | ||||
Refseq | XP_010260266.1 | 8e-62 | PREDICTED: dof zinc finger protein DOF5.4-like | ||||
Refseq | XP_010260267.1 | 8e-62 | PREDICTED: dof zinc finger protein DOF5.4-like | ||||
Refseq | XP_010260268.1 | 8e-62 | PREDICTED: dof zinc finger protein DOF5.4-like | ||||
TrEMBL | A0A2G5CVC4 | 0.0 | A0A2G5CVC4_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_036_00100.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G60200.1 | 1e-23 | TARGET OF MONOPTEROS 6 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Aqcoe1G258100.2.p |