PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe1G245800.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | WOX | ||||||||
Protein Properties | Length: 314aa MW: 33666.4 Da PI: 7.0422 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.7 | 9.8e-09 | 3 | 40 | 24 | 57 |
S--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 24 ypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +p ++e++++ +l ++ +++V++WFqNr+ + k+ Aqcoe1G245800.2.p 3 NPPRDEIRRIRVQLqeygQVGDANVFYWFQNRKSRSKH 40 7999*******************************995 PP | |||||||
2 | Wus_type_Homeobox | 67.6 | 2.3e-22 | 1 | 42 | 24 | 65 |
Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++P+++ei+ri+ +L+eyG+++d+NVfyWFQNrk+R+++kq Aqcoe1G245800.2.p 1 MVNPPRDEIRRIRVQLQEYGQVGDANVFYWFQNRKSRSKHKQ 42 78**************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00046 | 2.9E-6 | 3 | 40 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 5.26E-6 | 3 | 44 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008284 | Biological Process | positive regulation of cell proliferation | ||||
GO:0009735 | Biological Process | response to cytokinin | ||||
GO:0009793 | Biological Process | embryo development ending in seed dormancy | ||||
GO:0010075 | Biological Process | regulation of meristem growth | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence Send to blast |
MVNPPRDEIR RIRVQLQEYG QVGDANVFYW FQNRKSRSKH KQRSHLHTSK SHTQSSSVAA 60 TTFVGPSSSS SSSEKSPPKR TNKLLQMGSS GMNIMDAANS PTASVNQTYF QSQGDFSADP 120 FFYPVAQQAG NNNTLFSSQG LCFPELSNIV QIPDQVIVPC TGFLLSELVN QNATKRYEEE 180 EKLKLEQQLS YSTAVTTTNS TTTTTTTTTT PNTIPSSSTS VGSININQIQ GGGESGAGGL 240 GLATAAMKST VFINNVAVEV ALGPFNVRDA FGEDALLVHS SGQPVVTNEW GVTLQSLQPG 300 AVYYLVCASN IFA* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002273188.1 | 1e-107 | PREDICTED: WUSCHEL-related homeobox 9 | ||||
TrEMBL | A0A2G5CUU9 | 0.0 | A0A2G5CUU9_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_036_00007.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33880.1 | 2e-24 | homeobox-3 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe1G245800.2.p |