PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G182600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 491aa    MW: 54857.4 Da    PI: 4.5079
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G182600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM106.72.9e-33111352127
                NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                        ppGfrF Ptd e++ ++L+ k+++ + e+  +i+++d+ ++ P++L + ++  +e+ +yfF++rd+ky++g+r+nra+k g+ ka+g dk+v
  Aqcoe1G182600.1.p  11 PPGFRFVPTDAEVL-KHLEMKIANPQYEC-PMITSIDVSQHTPEELVNLYRPkGEDICYFFTSRDRKYQKGTRPNRAAKGGFYKASGVDKPV 100
                        9***********99.99*********999.88**************854443155577********************************** PP

                NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyr 127
                        ++k+g+ +g +++Lv+ +g++++++ t+W+m ey 
  Aqcoe1G182600.1.p 101 MDKNGKIIGSRRSLVYQTGTHKNSTTTSWLMTEYL 135
                        **********************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-376162IPR003441NAC domain
PROSITE profilePS5100537.20510163IPR003441NAC domain
PfamPF023653.1E-1511134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    Send to blast
MRPPMKNRRY PPGFRFVPTD AEVLKHLEMK IANPQYECPM ITSIDVSQHT PEELVNLYRP  60
KGEDICYFFT SRDRKYQKGT RPNRAAKGGF YKASGVDKPV MDKNGKIIGS RRSLVYQTGT  120
HKNSTTTSWL MTEYLIDKYQ RPIDQQSNSM MLDESVICKV YFNTQKRKKS QREQGESSKS  180
QRGSDYEAAG HTEGENQMVV STNCSKEVQG LGDMMNSVEQ VMVENKMDKS VDKGKGPLIY  240
YNDPAPLSWD IPADPSCPST SLGSYDKCYD TNFYGSGQFN SNLDSWPNGG DMISQYTQVH  300
GSENGGMYPN GYGCGYDEQL LNMVHSNDQH NSLNNDGGCT FVAQCAERDG NKFDNRLTSG  360
LNGGDNIGYD GQLVNMQFND QLHSLNNDGG CSFDFQNATG DGNQLQFDYN LTSQSIGNNI  420
GYDLQFPDMQ FDDQLTLNKD GGSIINFQSL IGDDNNLGYD FDDLFNSMNE EGGCVMNEEG  480
GCMQLQFLDP *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-281116116166Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.19e-34NAC domain containing protein 32