PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe1G101300.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

GeBP

Protein Properties

Length: 435aa MW: 47837.7 Da PI: 4.5216

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe1G101300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	103	2.5e-32	187	283	1	96
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifel 91 k+fq+lw+e+Dei +L+G+i+fk+++g +ps+ + afy+f+k+ + ++vsk+ql +Kir LK+K+++ k+ ++ g++p++sk h+ +++l Aqcoe1G101300.1.p 187 KKFQKLWTEQDEIDILKGMINFKKTKGNDPSAQVGAFYDFLKNDLRSDVSKQQLQSKIRTLKRKYTNTLKRaKQPGEDPEISKVHEAYVYKL 278 68******************************************************************955669************ PP DUF573 92 skkiW 96 sk++W Aqcoe1G101300.1.p 279 SKRVW 283 *** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	5.7E-29	189	283	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence Send to blast
MPSKRPSPLE ENPPSVSSSG SSDEEEEDSQ GEDENNEEEE EEELVTPIKS SSNIPNNSNS 60 IQTPSSVTQS LALSNGVGDD GEDDSTDDND DDESGSDSEN DSTQNNPISP TSPALDIKPI 120 SSKPMTETTP KPKKPIDNSV GKRSLEIDGD EKDSRKEKKK KKVADLVEED QEKKSTASVG 180 VGGGDSKKFQ KLWTEQDEID ILKGMINFKK TKGNDPSAQV GAFYDFLKND LRSDVSKQQL 240 QSKIRTLKRK YTNTLKRAKQ PGEDPEISKV HEAYVYKLSK RVWPGDIGKD DEGDAKSVGV 300 PVAASVDDEK STKKNKSVKV SDGLASCKTT KVTATPTDSA TVVKTEEVEI AHENPYLEQS 360 FVDRNNSMLP VVPPALGQIF SNRRWDLIES SNASELDKKW KNVMIAETEA YIDRLELVKE 420 QTKMMLDRLK SSNC*

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence Send to blast

MPSKRPSPLE ENPPSVSSSG SSDEEEEDSQ GEDENNEEEE EEELVTPIKS SSNIPNNSNS  60
IQTPSSVTQS LALSNGVGDD GEDDSTDDND DDESGSDSEN DSTQNNPISP TSPALDIKPI  120
SSKPMTETTP KPKKPIDNSV GKRSLEIDGD EKDSRKEKKK KKVADLVEED QEKKSTASVG  180
VGGGDSKKFQ KLWTEQDEID ILKGMINFKK TKGNDPSAQV GAFYDFLKND LRSDVSKQQL  240
QSKIRTLKRK YTNTLKRAKQ PGEDPEISKV HEAYVYKLSK RVWPGDIGKD DEGDAKSVGV  300
PVAASVDDEK STKKNKSVKV SDGLASCKTT KVTATPTDSA TVVKTEEVEI AHENPYLEQS  360
FVDRNNSMLP VVPPALGQIF SNRRWDLIES SNASELDKKW KNVMIAETEA YIDRLELVKE  420
QTKMMLDRLK SSNC*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5EFW0	0.0	A0A2G5EFW0_AQUCA; Uncharacterized protein
STRING	Aquca_009_00896.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	7e-22	DNA-binding storekeeper protein-related transcriptional regulator

Link Out ? help Back to Top
Phytozome	Aqcoe1G101300.1.p