PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe1G078800.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | TALE | ||||||||
Protein Properties | Length: 723aa MW: 79568.3 Da PI: 7.1604 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.1 | 3.5e-09 | 417 | 454 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + Aqcoe1G078800.2.p 417 FEHflHPYPKDTDKLMLAKQTGLTRSQVSNWFINARVR 454 664459******************************88 PP | |||||||
2 | BELL | 124 | 6e-40 | 280 | 351 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qelq+kkakL+s+l+eV++rY+qy++q+q+v+ssFe++ag gsak Yt+lAl++iS++FrcLkdai++qi Aqcoe1G078800.2.p 280 EKQELQMKKAKLISMLDEVEQRYRQYHHQMQIVVSSFEQAAGFGSAKTYTALALQTISKQFRCLKDAISGQI 351 689********************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 9.8E-65 | 208 | 349 | IPR006563 | POX domain |
Pfam | PF07526 | 2.3E-50 | 213 | 348 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.034 | 395 | 458 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 2.7E-28 | 397 | 471 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 8.8E-9 | 398 | 462 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.30E-11 | 398 | 459 | No hit | No description |
SuperFamily | SSF46689 | 4.71E-17 | 399 | 465 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 6.5E-18 | 415 | 454 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009610 | Biological Process | response to symbiotic fungus | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010197 | Biological Process | polar nucleus fusion | ||||
GO:0010201 | Biological Process | response to continuous far red light stimulus by the high-irradiance response system | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 723 aa Download sequence Send to blast |
MATYFHGNPE IQADGLQTLY LMNPGYVGYS DTQQQPNMVF LNSAVGNSMN LSQSPQQNQH 60 FVGIPLQATP ISPTAASASQ QDPNRHSVHP QHEMSAIHGF VPRVQYNLWT PVDQSNQHQQ 120 QNLATISSVR VNNSINVDDV SSRLGLRRSV VTPPQQGLSL SLSSQQPGYG PYQTDSEIPP 180 TTAPTSGEDI RVSGGSSSSA SGISNGTSSM QSVLLGSKYL KAAQQLLDEV VNVGKGIKTE 240 LSKGTKEQIK ISNELSGVAG DSSTGGETST KRGAELTTTE KQELQMKKAK LISMLDEVEQ 300 RYRQYHHQMQ IVVSSFEQAA GFGSAKTYTA LALQTISKQF RCLKDAISGQ IRLTSKSLGE 360 DDCLGSGKVE GSRLRFVDHQ LRQQRALQQL GMIQHNAWRP QRGLPERSVS ILRAWLFEHF 420 LHPYPKDTDK LMLAKQTGLT RSQVSNWFIN ARVRLWKPMV EEMYTEETKD QEHNGTEGKS 480 KNEFTEESGS KSNGHQENSP SRTDQTRNVS SNQNSPREPN APPTSVSNPT IPTSTMEENF 540 RGEAGFFLMG SSNIEGITQG SNKKSRNTEM QNSPTSFHSI DMDMKPNETD RDLCMKFGND 600 RQSRDGYSLI TATTNHGGGF GAYSMGEMGR FDSDQFTTRF SGNGVSLTLG LPHCENLPLS 660 GAQQNYLTNQ NIQLGRRLEL GGAEPNEFCG MNSQQPSTTA YENINMQNRK RFAAQLLPDF 720 VA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 8e-16 | 404 | 462 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 8e-16 | 404 | 462 | 5 | 63 | Homeobox protein Meis2 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010247191.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 | ||||
Refseq | XP_010247219.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 | ||||
Refseq | XP_010247233.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 | ||||
Refseq | XP_019051997.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 1 | ||||
Swissprot | Q9SJ56 | 1e-161 | BLH1_ARATH; BEL1-like homeodomain protein 1 | ||||
TrEMBL | A0A2G5EF44 | 0.0 | A0A2G5EF44_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_009_00697.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35940.3 | 1e-143 | BEL1-like homeodomain 1 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe1G078800.2.p |
Publications ? help Back to Top | |||
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