PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G078200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Dof
Protein Properties Length: 327aa    MW: 36432.1 Da    PI: 4.6357
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G078200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof119.89.9e-383490662
             zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                        +cprC+s+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvP+Ggg+rkn++s+
  Aqcoe1G078200.1.p 34 PNCPRCNSSNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGSLRNVPIGGGCRKNRRSR 90
                       58***************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-292088IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.9013488IPR003851Zinc finger, Dof-type
PfamPF027013.7E-323488IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103672IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MFTTQNSEDF LQCPLPPRPI VMDRRWKPNV EIAPNCPRCN SSNTKFCYYN NYSLTQPRYF  60
CKSCRRYWTK GGSLRNVPIG GGCRKNRRSR SVPPTNERSV SNGSSSYGSE QSGLGRSGLH  120
PNEPNGNVSH DHTMNSLPMS DTSTIDLAVV YAKFLNQPPD SSPGLVMPDF PRDFDSSFDL  180
LSVSDTTPDS THVHFSQEQC IVGNNEVSDP PPEVHLSDGQ HQMLLGEFDL NFEEQERMSV  240
SQPAGLEESN GCGLQPILLP SSNLVAHDMY WSNSPATDIN FSWQATQLQG FDPVICDDDH  300
STFQSNSLDD NWSSFDIPNF DAFTRP*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00405DAPTransfer from AT3G52440Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019053989.11e-99PREDICTED: dof zinc finger protein DOF1.2-like
TrEMBLA0A2G5EEX50.0A0A2G5EEX5_AQUCA; Uncharacterized protein
STRINGAquca_009_00691.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.12e-40Dof family protein