PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G017700.3.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family G2-like
Protein Properties Length: 389aa    MW: 43189.2 Da    PI: 6.5804
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G017700.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like82.74.1e-26231281155
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        k+r+rWt++LHerFve+v+ L    +AtPk il+lm+ +gLt+ hvkSHLQkYR+
  Aqcoe1G017700.3.p 231 KTRIRWTQDLHERFVECVNCL----EATPKGILKLMDSDGLTIFHVKSHLQKYRM 281
                        68*******************....9****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.4E-24229282IPR009057Homeodomain-like
SuperFamilySSF466893.23E-14229281IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-17231282IPR006447Myb domain, plants
PfamPF002492.4E-6235280IPR001005SANT/Myb domain
PfamPF143791.1E-20312357IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MNTQKIGCYP LEFSGCSTDN SHPWPWNMGV CCQSSSSASQ AGLQLSNLGS ANSFTVASDH  60
LGSEASVFNT AEHYYQLGTP MFSQLPKSNT YISSHSPFED YLPVESERGV DFDIQSRDTL  120
QSIVKYSLPN NQNPRPSENS YRTCRSLLGS EHSSPWQNKL VIDNAALNRK NPSNPSEGSH  180
NTRVAYNPFA SELDPPSFQL IPDKQSAQTS PGVISYTSAS PVSSRAAVSN KTRIRWTQDL  240
HERFVECVNC LEATPKGILK LMDSDGLTIF HVKSHLQKYR MAKYIPESAE GKSDKKVPTS  300
DTIKLDPKAG LHIAEALRLQ LDVQMRLHEQ LEIQRNLQVR IEEQGKQLKK MFDQQAKNSD  360
LMCPDVQSTN QEDVSLEVSA DKLASQNT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-19231284259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-19231284259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-19231284259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-19231284259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-19231284259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-19231284259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-19231284259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-19231284259Protein PHOSPHATE STARVATION RESPONSE 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010265860.11e-100PREDICTED: myb family transcription factor PHL5-like
TrEMBLA0A2G5ECV20.0A0A2G5ECV2_AQUCA; Uncharacterized protein
STRINGAquca_009_00165.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.16e-61G2-like family protein