PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe0109s0001.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 166aa    MW: 18805.2 Da    PI: 11.0947
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe0109s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.82.9e-105496257
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--S CS
                WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHn 57
                        +D ynW+KYGqK+vkgse++             kkk++rs+ d+++ ei+Y+g H 
  Aqcoe0109s0001.1.p 54 EDVYNWKKYGQKQVKGSEYS------------QKKKIKRSH-DGQIREIIYKGGHY 96
                        7*****************96............59*******.*************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-83898IPR003657WRKY domain
SuperFamilySSF1182903.01E-94998IPR003657WRKY domain
SMARTSM007747.3E-853100IPR003657WRKY domain
PfamPF031061.9E-45495IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MTSSIVVLLQ YNLPLRTSDT GTASSFRRHR VTTARGRRRT RIISSHTVTG RPSEDVYNWK  60
KYGQKQVKGS EYSQKKKIKR SHDGQIREII YKGGHYYHPM AQPSRRSVRG STNDPILAWV  120
WSFTAAIQAT SSLIDRIEAV WQRWFCSTSS NQGCSADLAG HMDGR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011621822.22e-20probable WRKY transcription factor 20
TrEMBLA0A2G5CF685e-26A0A2G5CF68_AQUCA; Uncharacterized protein
TrEMBLA0A2G5CFA04e-26A0A2G5CFA0_AQUCA; Uncharacterized protein
STRINGAquca_058_00185.18e-27(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.11e-15WRKY DNA-binding protein 4