PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe0008s0008.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GeBP
Protein Properties Length: 391aa    MW: 43475.2 Da    PI: 5.1157
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe0008s0008.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57376.83.8e-24173270197
              DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgk.epsfskehdqkife 90 
                         klfqr++se+Dei +L Gl++fk+k +k   + +++fy+f+k+s+++ ++ sq+++K+ rL +K++k+ k+ak g  + ++s++h+ k++ 
  Aqcoe0008s0008.1.p 173 KLFQRIFSEKDEIDVLNGLLEFKNKGNKITNSALSEFYNFLKGSVNIGANLSQIINKVHRLHNKYRKNAKRAKPGAgHRTISNPHELKSYL 263
                         579*******************9999999999***************************************8877626789********** PP

              DUF573  91 lskkiWg 97 
                         lsk iW+
  Aqcoe0008s0008.1.p 264 LSKEIWD 270
                         ******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.6E-23175270IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MAPKRPSPSD QPPSSVSISE DEIEGTEGED SEEESESESE EEKTPKPIQS SNPNNKPVEE  60
EESGSDSDSD SDSDSDSDSD NEPVQHMVAT VKPISSKPMV DTQKSTKKPI SSKPIVDTPK  120
STKKPTSTST STSTSSAAMK RPLETGDNND KDSKKKKKKI ADIEERKSGE EKKLFQRIFS  180
EKDEIDVLNG LLEFKNKGNK ITNSALSEFY NFLKGSVNIG ANLSQIINKV HRLHNKYRKN  240
AKRAKPGAGH RTISNPHELK SYLLSKEIWD DQIFKDAEEN KSGGVTALNK TVSPKVVDLM  300
EEDNIIGSQY QYLDQSLKPQ NRLSLPMPPA DFGEITAKDG WDKLGSSKAQ VFDQRWKALI  360
IKEAEVYLER VELVQEQTKW MLDTHKSSDS *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5C4D90.0A0A2G5C4D9_AQUCA; Uncharacterized protein
STRINGAquca_097_00003.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-14DNA-binding storekeeper protein-related transcriptional regulator