PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco030448.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family Dof
Protein Properties Length: 369aa    MW: 37881.9 Da    PI: 8.793
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco030448.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.67.7e-403494262
       zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                 +e+ lkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvPvGgg+rknkks+
  Aco030448.1 34 PEQGLKCPRCDSPNTKFCYYNNYSLAQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNKKSK 94
                 67899*****************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027015.0E-333692IPR003851Zinc finger, Dof-type
ProDomPD0074784.0E-263790IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.4413892IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104076IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010052Biological Processguard cell differentiation
GO:0010118Biological Processstomatal movement
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1902066Biological Processregulation of cell wall pectin metabolic process
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MMASPAAAGV VDSQSSGGEG GRKSNPTANP LRPPEQGLKC PRCDSPNTKF CYYNNYSLAQ  60
PRHFCKTCRR YWTKGGALRN VPVGGGCRKN KKSKSSSAAA ASSRLPVSSI DPITGVPDPA  120
GGSLKFFGGP SSLIAASDFQ LGVLPFSRLH SPAASGMFAT ANQQYVAFGD MIAPSPAPGD  180
RISHPAAASH ASSMASFASF PTPAGGFPGE TAAVNSSTRS SIASSIESLS SINQDLHWKL  240
QQQRLAMFFG GETYKESGAS SALPGHFLEG SFHAPDGSKS QAASAAGCSG GSRKGGFGAT  300
DHTAPAWLID SCYNIPCSGS AAVTTAITTA NNNNNNNNSS SNDDNNNSSN WNGIPAAWSD  360
MPQFAALP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9475242e-53EU947524.1 Zea mays clone 346044 mRNA sequence.
GenBankKJ7269772e-53KJ726977.1 Zea mays clone pUT3678 C2C2-DOF transcription factor (DOF32) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020080063.10.0dof zinc finger protein DOF5.7
TrEMBLA0A199UDQ70.0A0A199UDQ7_ANACO; Dof zinc finger protein DOF5.7
STRINGXP_008810154.11e-105(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP14037367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.19e-39Dof family protein