PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco029477.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bZIP
Protein Properties Length: 431aa    MW: 45972.8 Da    PI: 6.6524
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco029477.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.97e-11298324127
                  XXXXCHHHCHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkae 27 
                  e+elkrerrkq+NRe+ArrsR+RK+++
  Aco029477.1 298 ERELKRERRKQSNRESARRSRLRKQEY 324
                  89************************9 PP
2bZIP_131.53.7e-103343722563
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  ++e+eeL+++v+eL +eN+aLk ele+lkk++++l++e+
  Aco029477.1 334 QQECEELARRVAELNSENSALKVELEHLKKTCSELEAEN 372
                  89*********************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.9E-846118IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.8E-6143270No hitNo description
Gene3DG3DSA:1.20.5.1703.3E-14295370No hitNo description
SMARTSM003382.3E-13298374IPR004827Basic-leucine zipper domain
PfamPF001703.3E-9298325IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.703300361IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.59E-7301362No hitNo description
CDDcd147021.90E-16303366No hitNo description
PROSITE patternPS000360305320IPR004827Basic-leucine zipper domain
PfamPF001705.7E-7334372IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MMAAAEEQNK PLLETSAAGG PTTTATTGVA AAAVAASTTA AAPPLMAYGA SSEWATSLQA  60
YYNSGGAASA VSAHAFFPPG ASHHSYAVWA PQMVSPYGTH IPISPMYHPG PMYAHPSMGM  120
NMPYPASEVE VRPIEGKIKG STSKGSSGNA RGSPEKSEDG RKGTSASADN ASRSEDGSEG  180
SSDTREDNDE QKESTATKKR KYRGMAVDGE TSQTATIAHC NNTIAESSYN ARGRSVTKLP  240
VSAPGRSALP NSSTNLNIGM DIWNTSHSAT VNVKPNEVTA ASAMVGRDGV MSEHQLDERE  300
LKRERRKQSN RESARRSRLR KQEYFLGTDL LCLQQECEEL ARRVAELNSE NSALKVELEH  360
LKKTCSELEA ENSQIMEEMV QLHEPGINID PSRMLRVSDS GSLARNNSNK SNGKFTNCDE  420
GKAATAHLVF *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1314320RRSRLRK
2314321RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020096288.10.0DNA-binding protein EMBP-1-like isoform X3
TrEMBLA0A2H3ZBF87e-89A0A2H3ZBF8_PHODC; G-box-binding factor 1-like isoform X1
STRINGXP_008811316.11e-89(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.15e-21G-box binding factor 1