PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aco022129.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family | NAC | ||||||||
Protein Properties | Length: 159aa MW: 17726.9 Da PI: 5.2987 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 129.3 | 2.9e-40 | 7 | 140 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 ppGf F Pt+eel+ +yL++k+e+++ ++e+vi+ +d+y v+P++Lp+ + ++ ++w+fF++ ++++a+g r++r+t sgyWkatg+ v+ Aco022129.1 7 PPGFCFYPTEEELLGFYLHNKLENERtEDIERVIPVLDVYGVDPEHLPErageaCRGGGCEQWFFFCPMQEREAQGGRPSRTTPSGYWKATGSPSLVY 104 9**********************9995566778***************6355533233667************************************* PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ +++ +g kk +vfy+grap+g+kt+W m++yr+ Aco022129.1 105 SAaTSRPIGQKKAMVFYQGRAPSGTKTKWKMNDYRA 140 9878889***************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.05E-43 | 3 | 147 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 42.174 | 6 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-21 | 7 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence Send to blast |
MSSSSFPPGF CFYPTEEELL GFYLHNKLEN ERTEDIERVI PVLDVYGVDP EHLPERAGEA 60 CRGGGCEQWF FFCPMQEREA QGGRPSRTTP SGYWKATGSP SLVYSAATSR PIGQKKAMVF 120 YQGRAPSGTK TKWKMNDYRA LDDQEQDIAI LTSSPKVS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-29 | 1 | 142 | 12 | 144 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-29 | 1 | 142 | 12 | 144 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-29 | 1 | 142 | 12 | 144 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-29 | 1 | 142 | 12 | 144 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-29 | 1 | 142 | 15 | 147 | NAC domain-containing protein 19 |
3swm_B | 1e-29 | 1 | 142 | 15 | 147 | NAC domain-containing protein 19 |
3swm_C | 1e-29 | 1 | 142 | 15 | 147 | NAC domain-containing protein 19 |
3swm_D | 1e-29 | 1 | 142 | 15 | 147 | NAC domain-containing protein 19 |
3swp_A | 1e-29 | 1 | 142 | 15 | 147 | NAC domain-containing protein 19 |
3swp_B | 1e-29 | 1 | 142 | 15 | 147 | NAC domain-containing protein 19 |
3swp_C | 1e-29 | 1 | 142 | 15 | 147 | NAC domain-containing protein 19 |
3swp_D | 1e-29 | 1 | 142 | 15 | 147 | NAC domain-containing protein 19 |
4dul_A | 1e-29 | 1 | 142 | 12 | 144 | NAC domain-containing protein 19 |
4dul_B | 1e-29 | 1 | 142 | 12 | 144 | NAC domain-containing protein 19 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020089120.1 | 1e-115 | NAC domain-containing protein 90-like | ||||
Swissprot | Q9FMR3 | 2e-57 | NAC90_ARATH; NAC domain-containing protein 90 | ||||
TrEMBL | A0A199VMI2 | 1e-114 | A0A199VMI2_ANACO; NAC domain-containing protein 90 | ||||
STRING | GSMUA_Achr6P19400_001 | 4e-65 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1005 | 38 | 140 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 8e-60 | NAC domain containing protein 90 |
Link Out ? help Back to Top | |
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Phytozome | Aco022129.1 |
Publications ? help Back to Top | |||
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