PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco022052.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 270aa    MW: 28791.9 Da    PI: 5.2854
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco022052.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.42.7e-16108154252
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 
                  ++kGVr++k +g+W+AeIr p++   r+r +lg+f+tae Aa+a+ aa ++
  Aco022052.1 108 RFKGVRRRK-WGKWAAEIRNPKT---RTRLWLGTFDTAEAAAAAYQAASRR 154
                  69****998.**********965...4**********77777777777555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.97E-16107140No hitNo description
PfamPF008473.9E-11108153IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.6E-22108157IPR001471AP2/ERF domain
SuperFamilySSF541713.47E-16108158IPR016177DNA-binding domain
SMARTSM003809.0E-20108178IPR001471AP2/ERF domain
PROSITE profilePS5103219.678108172IPR001471AP2/ERF domain
PRINTSPR003678.0E-10109120IPR001471AP2/ERF domain
PRINTSPR003678.0E-10131147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MSGSKRRVNN KRLESTNQIE SRPSVRKVRV VMDDPDATES SEDEGGVGGG RRVVAEFFVY  60
PINPNPNPKT LMKRSRAKRS LPKNPKSSSS SSSSSPSPPR SSSPPSARFK GVRRRKWGKW  120
AAEIRNPKTR TRLWLGTFDT AEAAAAAYQA ASRRFAEELA GSSPSAAAEA FSAPSPSSVL  180
DLSSASASSS AAEGEAAPAP VKTVAELMEE LGLPFPYIGL GFDGLEKGDD ELGELGDDAL  240
FGADFDIGEF PDVADFFNLD AFAERELQT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109115KGVRRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020088022.10.0dehydration-responsive element-binding protein 2D-like
TrEMBLA0A199VLU41e-120A0A199VLU4_ANACO; Ethylene-responsive transcription factor ERF118
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.11e-12ERF family protein