PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco020828.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family Dof
Protein Properties Length: 222aa    MW: 24764 Da    PI: 8.8365
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco020828.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof70.91.8e-22119165551
       zf-Dof   5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPv 51 
                  +++cpr dstntk Cy++nyslsqPryfCk+C+ry t+G +lrnv  
  Aco020828.1 119 KKRCPRYDSTNTKSCYFDNYSLSQPRYFCKTCHRYRTRGDTLRNVSC 165
                  679*****************************************964 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-14114163IPR003851Zinc finger, Dof-type
PfamPF027012.9E-17119165IPR003851Zinc finger, Dof-type
PROSITE profilePS5088419.275120174IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MSSSDAEIVD VGGGPPKQPS KRSKGKEMRL TKDSASVEER LALLENILSK VGERYTEMAD  60
TFNAFNDDVR SMEESVATAM ATFRSVIEKL QGNITRRDEE RTKLIEELVT RVDEVEDLKK  120
RCPRYDSTNT KSCYFDNYSL SQPRYFCKTC HRYRTRGDTL RNVSCRRYMR CSRVYEIFTA  180
TAVDAAQTAA AAAAVAAQAI ATAVAAQVPC EKRGERGKAK I*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020101642.17e-53uncharacterized protein LOC109719402
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.11e-20TARGET OF MONOPTEROS 6