PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco018826.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family STAT
Protein Properties Length: 730aa    MW: 81867 Da    PI: 6.697
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco018826.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT183.33.1e-572053251119
         STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipk.lkkyp 96 
                  l+vvll+a+gq+v+k++e+ asL+yad+g++veks d++eapLL+s+dG+e++s+d+p+ llrGrasfklkisqLssk+dnrLfr++f++++  + yp
  Aco018826.1 205 LEVVLLDAFGQAVHKEMEIAASLVYADNGAPVEKSrDEKEAPLLTSCDGLEYPSSDKPVSLLRGRASFKLKISQLSSKSDNRLFRVRFHSLHnTQGYP 302
                  79*********************************999**************************************************87651677** PP

         STAT  97 fleavskpirCisrsrntrsssl 119
                  f ea+s+pirCisr+r+tr+ ++
  Aco018826.1 303 FREAYSHPIRCISRNRSTRPYGS 325
                  ******************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.505.107.5E-8584650IPR000980SH2 domain
SuperFamilySSF555501.35E-9588724IPR000980SH2 domain
PROSITE profilePS5000110.745592649IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 730 aa     Download sequence    Send to blast
MAFHKFTSSL HTLIHDLHNS YLARTLIFLS LFSQTTSDVR EDVPFLALSE ENKLILFPLV  60
LLHKEASSAG SSFPWTDLTH VSAMNECPLE KWVHVGCEVA RKSVRLHIDG NLVSEMNLSS  120
LCEDHKYRDD LKRITLVGND EKLEGYVYNI HVLPLSTTIK QQYEKNPPVK LSLDGSCSSD  180
GVEEGGDGVW SIVGGKASCR RNFSLEVVLL DAFGQAVHKE MEIAASLVYA DNGAPVEKSR  240
DEKEAPLLTS CDGLEYPSSD KPVSLLRGRA SFKLKISQLS SKSDNRLFRV RFHSLHNTQG  300
YPFREAYSHP IRCISRNRST RPYGSGKRAT SATLLLDELH SLKLNNGHGL IRDYSKDNHS  360
QKESRSSFGC SSPPKRFKID YDGSPMALDS NGMSEQPCKT NAEVRSNNTE GSGSAPSDSE  420
STDAKNFESR WMRDSTEPFS DALIFRYCLE GTHERSKLLK EAVNLASDEE MANFADQICL  480
YTGCSHHRNQ ILLSKRLIQE GADTWTAISR NNNRVLWSYA VPEIIRKLMY IACSANRGLS  540
TQDTEVLRQI AGCGDDLGRE EFDRLWYWLY PVAFSLTHEK LKKIWECTSP KWIEGFITRE  600
EAENALKGPQ GPQKPGTFVL RFPTSRSWPH PDAGSIVVAY VASDSSIRHR LLSLDLSDDR  660
EKYLRPLQDL LLEEPELSHL GRQVTAGTLN SEAEANMLEY HGESNCNSSS QGDYARLPYY  720
VKSGARHCC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM6645831e-127KM664583.1 Ananas bracteatus clone 49503 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020094967.10.0uncharacterized protein LOC109714683
TrEMBLA0A199UQ450.0A0A199UQ45_ANACO; Uncharacterized protein
STRINGXP_008784704.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75473135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.11e-156SH2 domain protein B