PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco017970.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family Dof
Protein Properties Length: 147aa    MW: 16328.9 Da    PI: 11.8105
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco017970.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof46.11.1e-1476106232
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryf 32 
                  ++ alkcp+Cdstntk Cy+nnyslsqPry+
  Aco017970.1  76 PDPALKCPQCDSTNTKSCYFNNYSLSQPRYL 106
                  67899************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-972102IPR003851Zinc finger, Dof-type
PfamPF027017.8E-1279106IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MSWEGETPRE GARFLGRRDT LGRRRFTLEN KKIKGKKKKS KKKTPQKPSP RPPAPSLPIA  60
ACPPAALARL AKIPQPDPAL KCPQCDSTNT KSCYFNNYSL SQPRYLHPRG GPPLGGGHLR  120
PRRSRGPRCS RGQQQRPRRG EDLGNK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12238RRRFTLENKKIKGKKKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009343295.12e-17PREDICTED: dof zinc finger protein DOF3.6-like
TrEMBLA0A199V2525e-98A0A199V252_ANACO; Dof zinc finger protein DOF3.6
STRINGXP_009343295.19e-17(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP14037367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.33e-11OBF-binding protein 3