 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aco017732.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
|
| Family |
C3H |
| Protein Properties |
Length: 483aa MW: 52875.8 Da PI: 9.8352 |
| Description |
C3H family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco017732.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-CCCH | 35.8 | 1.4e-11 | 5 | 27 | 3 | 26 |
S---SGGGGTS--TTTTT-SS-SS CS
zf-CCCH 3 telCrffartGtCkyGdrCkFaHg 26
+e+Cr+f+r G CkyG++CkF H+
Aco017732.1 5 QEPCRNFLR-GSCKYGAQCKFLHV 27
79*******.*************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 483 aa
Download sequence Send
to blast |
MNRRQEPCRN FLRGSCKYGA QCKFLHVSPQ QSKSNSFGFG TQSTSQSIQT SQQQKPNPYG 60
FGVQNNSQLK GASDFGARNQ SLAKPFENKW TRSSSVAPSK QTDTQPQAPV HICTDPESCK 120
RQIAEDFKNE APIWKLTCYS HGKNGPCDIL GDISFEELRA VAYEDARQGC SLQSIVERER 180
NLLNSKLLDF DNLLRNPYVL QKSGVPMVGP SPGTNSVAPF GASQSNAPPV FSSFSQLGAV 240
TNAGSSFRQF CLFFFRASAP GTPSNTVFGQ SNSFQNPSQN TTFGQLSSSQ NSSPNNIFGQ 300
SNSFQNTSQS TNFGQSNSFL NTSQASAGFE MKFGPPVAFG SQLASQPFGS SPGIGMSNFS 360
AGDFKATNNQ FFPQPGSSSS QSKSFDDWLK VPSDSANQSS NEYQRKSRPK GFVPKGFDNL 420
IRQKFQGKQK LKKVYFLLPE AEVSDAKREK PNIMVSKIAL LQEPERKITR TEKVLCSPDV 480
WC*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that binds double-stranded DNA and the single-stranded RNA polymers poly(rA), poly(rU) and poly(rG), but not poly(rC). Mediates optimal plant architecture through brassinosteroid (BR) signaling. May act as a negative regulator in sterol homeostasis (PubMed:18953406). Acts as negative regulator of BR signaling. Binds to the specific DNA sequence 5'-CTCGC-3' of BZR1 promoter and negatively regulates BZR1. Acts as an antagonistic transcription factor of BZR1 to attenuate the BR signaling pathway and regulate leaf bending. Represses the expression of ILI1, and activates that of IBH1 to balance the regulation activity of BZR1 (PubMed:22570626). {ECO:0000269|PubMed:18953406, ECO:0000269|PubMed:22570626}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by 24-epibrassinolide. {ECO:0000269|PubMed:18953406, ECO:0000269|PubMed:22570626}. |
