PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco017301.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family G2-like
Protein Properties Length: 320aa    MW: 35867.1 Da    PI: 9.5445
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco017301.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.23.2e-32149202255
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Aco017301.1 149 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 202
                  9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.6E-29146202IPR009057Homeodomain-like
SuperFamilySSF466891.97E-15147203IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-23149203IPR006447Myb domain, plants
PfamPF002491.6E-7150201IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MELFQAQPDL SLQISPPASK TNEPVELGFW RRALDTNYTN PPSAAPHAVD KLFDLSLANQ  60
SSFPTTTTTT TFPHHHSHSH SHHRPFLYEG YHQNQEYISN CMRPIRGIPV YQASPSFHLL  120
QSQLQAQAQQ PRSPRFLSRL PAKKSARAPR MRWTTSLHAR FVHAVELLGG HERATPKSVL  180
ELMDVKDLTL AHVKSHLQMY RTIKTTDKPV TASGQAENLE ISDENNLRES NKYRGSESSI  240
LHGKSVGNDG KNLRGLWINS SSRGVWFSDK QRDSTPGSIN SFEEMQSKCF EAESNLNSSF  300
LSSVSALTPN LEFTLGRPH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-16150204458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-16150204458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-16150204458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-16150204458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-16150204458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-16150204458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-16150204458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-16150204458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020084021.10.0probable transcription factor KAN2 isoform X1
TrEMBLA0A199W4Z61e-115A0A199W4Z6_ANACO; Putative transcription factor KAN2
STRINGXP_008800121.11e-110(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP94383445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.18e-49G2-like family protein