PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aco016738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family | NAC | ||||||||
Protein Properties | Length: 232aa MW: 26106.2 Da PI: 6.5403 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 119.1 | 4.1e-37 | 1 | 120 | 12 | 127 |
NAM 12 eelvveyLkkkvegkkleleevikevdiykvePwdLp.k...kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104 eel+++yL +k+e+++l++e+vi+ vd+y+++P++Lp + + + + ++w+fF++r++++++g r+ r+t gyWkatg+ v+s++++++g+kk Aco016738.1 1 EELLSFYLVNKLESRRLDIERVIPVVDVYTCDPSQLPpMsgdA-SIrDPEQWFFFCPRQERETQGGRPARTTPFGYWKATGSPSYVYSSGNKVIGVKK 97 79*****************9****************9544532.222556************************************************ PP NAM 105 tLvfykgrapkgektdWvmheyr 127 t+vfy+grap+g+kt+W m+ey+ Aco016738.1 98 TMVFYRGRAPNGTKTTWKMNEYK 120 **********************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02365 | 4.3E-16 | 1 | 120 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 40.554 | 1 | 148 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.22E-40 | 1 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence Send to blast |
EELLSFYLVN KLESRRLDIE RVIPVVDVYT CDPSQLPPMS GDASIRDPEQ WFFFCPRQER 60 ETQGGRPART TPFGYWKATG SPSYVYSSGN KVIGVKKTMV FYRGRAPNGT KTTWKMNEYK 120 ALREEALGLP ATAPRLRNEF SLCRLYIKTT TLRSFDRRPL NPPKSEIRPS TSEAPASNTD 180 PVVAAAERAY SHDSSSSGDG GGSQQMAPDQ QGAMDYWHDL LEEFDQDFTW A* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 6e-25 | 1 | 150 | 26 | 170 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020107471.1 | 1e-172 | NAC domain-containing protein 90-like isoform X1 | ||||
Swissprot | Q9FMR3 | 1e-63 | NAC90_ARATH; NAC domain-containing protein 90 | ||||
TrEMBL | A0A199V3W7 | 1e-171 | A0A199V3W7_ANACO; NAC domain-containing protein 90 | ||||
STRING | XP_008776160.1 | 2e-89 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1005 | 38 | 140 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 6e-66 | NAC domain containing protein 90 |
Link Out ? help Back to Top | |
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Phytozome | Aco016738.1 |
Publications ? help Back to Top | |||
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