PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco015791.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

bHLH

Protein Properties

Length: 499aa MW: 54992.3 Da PI: 6.7874

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco015791.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.3	0.00016	390	423	16	54
HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + +++ L++++ + +K + a++L +A++YIk L Aco015791.1 390 LTDKITALQQIVSPF-----GKTDTASVLLEAIKYIKFL 423 678999999999998.....8****************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.156	374	423	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	3.4E-9	389	438	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	3.2E-8	389	432	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	9.17E-5	389	428	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence Send to blast
MAQENSEASS SVTLISSSRG TNNNISSSWW DMHGNSSSSS SSLSSCSNTT MNNNRSSSSS 60 SSSSWQQLLH RPDHRHGNPC GHVGIDMASQ GPLKLSSEAG ESHLWNQVLL NAGSSMNMQN 120 THGGENFLEN LSSKSLSSEM FDPAYDYLKK MDSTWEFNTN APSLNTLQKE LMRSYDGTML 180 EPERMTNLSN LVINWSIAPP DPQIDHRIAP PSCEVSMDNP SVHSQYLAPS ISHIEHEVIP 240 HSQLDSCNGM IDGSTSYKED SHHQEFGYQI GLNNSILGLN NKLCSGLMTD IPWSNTRSLS 300 DFISFSGCLS KPEVELRGPS NPYGKISDPF EKKKQGLETS STRVNNRGSR TTSDGKKKRS 360 EDSSETLAKK IKSESPTATS LKLQVPKVKL TDKITALQQI VSPFGKTDTA SVLLEAIKYI 420 KFLHEQVQLL SDPYMKPSPT KDNAWGGLDI RKEMAEIKID SLRSRGLCLV PISCTPQVYK 480 ESSGPDYWTP PYRSCSYR*

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence Send to blast

MAQENSEASS SVTLISSSRG TNNNISSSWW DMHGNSSSSS SSLSSCSNTT MNNNRSSSSS  60
SSSSWQQLLH RPDHRHGNPC GHVGIDMASQ GPLKLSSEAG ESHLWNQVLL NAGSSMNMQN  120
THGGENFLEN LSSKSLSSEM FDPAYDYLKK MDSTWEFNTN APSLNTLQKE LMRSYDGTML  180
EPERMTNLSN LVINWSIAPP DPQIDHRIAP PSCEVSMDNP SVHSQYLAPS ISHIEHEVIP  240
HSQLDSCNGM IDGSTSYKED SHHQEFGYQI GLNNSILGLN NKLCSGLMTD IPWSNTRSLS  300
DFISFSGCLS KPEVELRGPS NPYGKISDPF EKKKQGLETS STRVNNRGSR TTSDGKKKRS  360
EDSSETLAKK IKSESPTATS LKLQVPKVKL TDKITALQQI VSPFGKTDTA SVLLEAIKYI  420
KFLHEQVQLL SDPYMKPSPT KDNAWGGLDI RKEMAEIKID SLRSRGLCLV PISCTPQVYK  480
ESSGPDYWTP PYRSCSYR*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020095378.1	0.0	transcription factor bHLH111-like
TrEMBL	A0A199VRZ7	0.0	A0A199VRZ7_ANACO; Transcription factor bHLH111
STRING	XP_008811082.1	1e-153	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7169	7	9

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	2e-46	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aco015791.1