PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco015498.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family TALE
Protein Properties Length: 620aa    MW: 68904.8 Da    PI: 7.0379
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco015498.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.26.7e-093954321954
                  HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                  Fe   ++yps  ++  LA+++gL+ +qV++WF N R +
  Aco015498.1 395 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 432
                  664459******************************88 PP

2BELL107.96.2e-35257326372
         BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                   elqk+kakL s+leeVd+rY++y+eq+++v+ +Feavag g+a++Y slA+k++SrhFrcL+d i++qi
  Aco015498.1 257 LELQKRKAKLYSMLEEVDRRYRRYCEQMRAVVLAFEAVAGEGAAAVYSSLASKTMSRHFRCLRDGIVGQI 326
                  589*****************************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.4E-57191324IPR006563POX domain
PfamPF075262.7E-46197322IPR006563POX domain
PROSITE profilePS5007112.147373436IPR001356Homeobox domain
SMARTSM003897.0E-9376440IPR001356Homeobox domain
CDDcd000862.77E-11376437No hitNo description
SuperFamilySSF466892.95E-17377443IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.7E-28379443IPR009057Homeodomain-like
PfamPF059208.2E-18393432IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 620 aa     Download sequence    Send to blast
MAHEYQHQQH HHHHHHHQPD FISATNNAAA ATAVALHGFG TNHELYDLQA GMEMLGIPSK  60
QPHAQNVADG SWKVFFPKAG SSSTIGFSQP STDAGLMGAP EPNMGTWPPQ SNRMAVVDQS  120
IRCLLPSEGG EQANRELSLS LCNADPSGSG FHYQVEDASL RKPEDSLHQQ EVFFFGPSAA  180
AASAPMASLY QQHPQQLKNS KYLLPAQELL NEFCSLGKEH GSSTLKRQSK ISKQWDEGGS  240
SSSSSPWTQP LHTLEILELQ KRKAKLYSML EEVDRRYRRY CEQMRAVVLA FEAVAGEGAA  300
AVYSSLASKT MSRHFRCLRD GIVGQISATR KAMGEKDPVA PGTTRGETPR LKLLDQCLRQ  360
QKAFQQPGGT MESHPWRPQR GLPERSVSIL RAWLFEHFLH PYPSDVDKHI LARQTGLSRS  420
QVSNWFINAR VRLWKPMVEE MYMEELKEQE NQSPRTTTTT IHEDNDHNNN HHHHHHLESN  480
PNPNPNPNPN PNLIEQKPTP VQLLHDSGSL ASIINSKGAA EPRVESFGFV DLDFASYGQC  540
GGHGARGGVS LTLGLQRHDN ASQAPTLLFP RSDHHHHQHI EENQQQASQF SINMDGAEGS  600
QHLPYRNLMG AQLLHDLAG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-15382440563Homeobox protein Meis2
3k2a_B2e-15382440563Homeobox protein Meis2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020084170.10.0homeobox protein BEL1 homolog
SwissprotQ388971e-120BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLA0A199UUQ30.0A0A199UUQ3_ANACO; Homeobox protein BEL
STRINGXP_008807227.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38143764
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-103TALE family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  2. Lozano-Sotomayor P, et al.
    Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
    Plant J., 2016. 88(3): p. 437-451
    [PMID:27402171]