PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco014290.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

CPP

Protein Properties

Length: 935aa MW: 102177 Da PI: 6.7973

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco014290.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.4	1.8e-15	554	592	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCk+skClk+YC+Cfaag++Cse C C +C+N++e Aco014290.1 554 HKRCNCKRSKCLKLYCDCFAAGAFCSEACACLECSNRSE 592 689*********************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	8.4E-15	552	593	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	20.768	553	657	IPR005172	CRC domain
Pfam	PF03638	4.1E-12	555	590	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 935 aa Download sequence Send to blast
MDSPDAVAKP SSAAAAAESP QVKDSPFLNF ASTLSPIQPV DTRPAAFVDV NFPSPEPVFK 60 TPHTNHLRKL DLLRRCEQLP SPSHNPKLFS EVVPPVSSSM AQLNTCCGKE CEGDESLPQD 120 RPCSSPSTCV DAFLVEPSED CENPSGSRDA SLEEASKLSQ INKSEVQIDC RQKDSGPVRD 180 LCSNSPSLHL DQDSGGLRTS QSESISTKEI EMKIPASTTK ELMVEDVKFS YQAEQPLAGL 240 KKSSNEEHLG KPDKQKEVKV IPHTEELQPV LKNAIKGDGS SVERGAATLI QGHRAQDVKL 300 HTGSGQWGES SCNPQFLPQP NDASRVVDSY NDSCLAVSVV SAENQTLWDQ EDGAAQCPRG 360 MRKRLQFEAV ENNQKLSSWL YSDLTDSTDD VSNAESQLHL DKHSVNASDE IPIVNSSKSE 420 TFLHKSSANV NRGGQKKATT VRMVPRPSGI GLHLNSVASI GLSSEKSLTN PGIASIKEEN 480 QDNPMLKLPE NSSSYQSPLD VEPLRSSQPS KCTDIIVTPI NVKSVPAKDA SRSEESSKMS 540 PRKKRKKAPE DEGHKRCNCK RSKCLKLYCD CFAAGAFCSE ACACLECSNR SEYQDTIREA 600 KQQIESRNPL AFAPKVVLRV TQQNQENEVR TFILSSSQAG VGCSFGCRCE GCKNTYGRKD 660 GCGELIEIEH KKPVEREEKD LSAGKLRSTG VNMEVINTSQ RLLRLSPVTP SIQGSNSGNN 720 VPKSHKLPSS YHTSPESGAL VLPYYVESPS SPTNSMSINT FEEAREELSM IPYDQDQALL 780 KLDSFSPGWD GFPDICNLSP LTSLSPSTTH PSSSKIKEPK IIQKKVFPWR SSPATPLPHF 840 AERKIFSEPD SESVLPNIRE DDIPQEISDE RLPIKSVQAS SPKQKRVSPP QRRLHGTRSS 900 SSPSLRSGRK FILQSVPSFP PLTPYSKNNR GQGS*

Sequence ? help Back to Top

Protein Sequence Length: 935 aa Download sequence Send to blast

MDSPDAVAKP SSAAAAAESP QVKDSPFLNF ASTLSPIQPV DTRPAAFVDV NFPSPEPVFK  60
TPHTNHLRKL DLLRRCEQLP SPSHNPKLFS EVVPPVSSSM AQLNTCCGKE CEGDESLPQD  120
RPCSSPSTCV DAFLVEPSED CENPSGSRDA SLEEASKLSQ INKSEVQIDC RQKDSGPVRD  180
LCSNSPSLHL DQDSGGLRTS QSESISTKEI EMKIPASTTK ELMVEDVKFS YQAEQPLAGL  240
KKSSNEEHLG KPDKQKEVKV IPHTEELQPV LKNAIKGDGS SVERGAATLI QGHRAQDVKL  300
HTGSGQWGES SCNPQFLPQP NDASRVVDSY NDSCLAVSVV SAENQTLWDQ EDGAAQCPRG  360
MRKRLQFEAV ENNQKLSSWL YSDLTDSTDD VSNAESQLHL DKHSVNASDE IPIVNSSKSE  420
TFLHKSSANV NRGGQKKATT VRMVPRPSGI GLHLNSVASI GLSSEKSLTN PGIASIKEEN  480
QDNPMLKLPE NSSSYQSPLD VEPLRSSQPS KCTDIIVTPI NVKSVPAKDA SRSEESSKMS  540
PRKKRKKAPE DEGHKRCNCK RSKCLKLYCD CFAAGAFCSE ACACLECSNR SEYQDTIREA  600
KQQIESRNPL AFAPKVVLRV TQQNQENEVR TFILSSSQAG VGCSFGCRCE GCKNTYGRKD  660
GCGELIEIEH KKPVEREEKD LSAGKLRSTG VNMEVINTSQ RLLRLSPVTP SIQGSNSGNN  720
VPKSHKLPSS YHTSPESGAL VLPYYVESPS SPTNSMSINT FEEAREELSM IPYDQDQALL  780
KLDSFSPGWD GFPDICNLSP LTSLSPSTTH PSSSKIKEPK IIQKKVFPWR SSPATPLPHF  840
AERKIFSEPD SESVLPNIRE DDIPQEISDE RLPIKSVQAS SPKQKRVSPP QRRLHGTRSS  900
SSPSLRSGRK FILQSVPSFP PLTPYSKNNR GQGS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	542	546	KKRKK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KM664730	1e-177	KM664730.1 Ananas bracteatus clone 49728a microsatellite sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020089358.1	0.0	uncharacterized protein LOC109710949 isoform X4
TrEMBL	A0A199W140	0.0	A0A199W140_ANACO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP20767	5	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	3e-33	TESMIN/TSO1-like CXC 2

Link Out ? help Back to Top
Phytozome	Aco014290.1