PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aco013223.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family | NAC | ||||||||
Protein Properties | Length: 615aa MW: 68472.3 Da PI: 4.6821 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.7 | 1.6e-51 | 8 | 146 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 lp GfrFhPtdeelv++yLk+k++g+ +++evi+e+d++k+ePwdLp k +++++ ew+fF+++d+kya+g+r+nrat++gyWkatgkd+ + +k Aco013223.1 8 LPLGFRFHPTDEELVNHYLKRKINGRIKSEAEVIPEIDVCKCEPWDLPgKsLIRSDDPEWFFFAPKDRKYANGHRSNRATEKGYWKATGKDRIIRAKn 105 699************************99999****************6446677888*************************************986 PP NAM 96 .....kgel.....vglkktLvfykgrapkgektdWvmheyrl 128 k + +g+kktLvf++grap+g++t W+mheyr Aco013223.1 106 aatgsK--KhkpavIGMKKTLVFHRGRAPRGVRTGWIMHEYRT 146 665541..156677***************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.03E-57 | 4 | 167 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 56.254 | 8 | 167 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.9E-28 | 9 | 145 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 615 aa Download sequence Send to blast |
MTVPLQSLPL GFRFHPTDEE LVNHYLKRKI NGRIKSEAEV IPEIDVCKCE PWDLPGKSLI 60 RSDDPEWFFF APKDRKYANG HRSNRATEKG YWKATGKDRI IRAKNAATGS KKHKPAVIGM 120 KKTLVFHRGR APRGVRTGWI MHEYRTTEPE FDSGEQGGYV LYRLFKKEED KTPSSNVEDV 180 ETTGLSPSPC KSSPVDAQHE AEATEEISIP LNQESTPLIL QEDLRSLEQP AEIKRCLVDK 240 PESSTAYHIK PDENFRNLTP DANTGEAGEM ADPPQDLFAG LDDDLRYEQI DPNEFPRISS 300 PMLPYTDHPF FGNINQGSPS GYFDLDNNHD DSINDFLNSV LTNSDERPPP CSNIQTEFNL 360 LELHSGTVYS SWCKDSATSS DSDGTPGLDA PDRSRGFARV PNPPPPLPPR LPHISSPTYS 420 TSSAAESLHD SSNAMEESSA QNSAISNGDN LDETGIMIRV RPLMDSTFAL EQQGTAARRL 480 RLETDIINRL ETAIRNASYV GTDSETSTTK DDFGDDASIS SNDGIECRAS NSEVEEDADD 540 NIPESNDVLD PNVVDKLKEL SVHDHKSQPG SAHQDAQGRQ CDQTFISRTK EEDRKVELWK 600 SVTSKFSSRD VRRC* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 6e-42 | 7 | 168 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 6e-42 | 7 | 168 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 6e-42 | 7 | 168 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 6e-42 | 7 | 168 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
4dul_A | 6e-42 | 7 | 168 | 16 | 166 | NAC domain-containing protein 19 |
4dul_B | 6e-42 | 7 | 168 | 16 | 166 | NAC domain-containing protein 19 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020114975.1 | 0.0 | NAC domain-containing protein 14-like isoform X1 | ||||
TrEMBL | A0A199V7U4 | 0.0 | A0A199V7U4_ANACO; NAC domain-containing protein 14 | ||||
STRING | XP_008788721.1 | 1e-156 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5172 | 38 | 59 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 3e-73 | NAC 014 |
Link Out ? help Back to Top | |
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Phytozome | Aco013223.1 |