PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aco013059.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family | NAC | ||||||||
Protein Properties | Length: 458aa MW: 51285.8 Da PI: 4.6988 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 153.8 | 7.6e-48 | 15 | 141 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 pGfrFhPt+eel+++yL++ v+gkkl++ +vi++v++y+++PwdLp+ +k +e+ewyf+++rd+++a+g r++r+t++g+Wkatg+d+++ s+ ++ Aco013059.1 15 PGFRFHPTEEELLDFYLRRAVNGKKLHF-DVIATVHLYRYNPWDLPSLAKIGEREWYFYVPRDRRQANGGRPSRTTERGFWKATGSDRPIRSAadPKR 111 9*************************99.99***************8888899**************************************9877778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 l+glkktLv+y+grap+g+ktdWvm+eyrl Aco013059.1 112 LIGLKKTLVYYQGRAPRGTKTDWVMNEYRL 141 8***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.88E-55 | 12 | 167 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.849 | 13 | 167 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.0E-23 | 15 | 141 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence Send to blast |
MEMQRSSGTA EVELPGFRFH PTEEELLDFY LRRAVNGKKL HFDVIATVHL YRYNPWDLPS 60 LAKIGEREWY FYVPRDRRQA NGGRPSRTTE RGFWKATGSD RPIRSAADPK RLIGLKKTLV 120 YYQGRAPRGT KTDWVMNEYR LPDANGAAAS AAAPPQEDIV LCKIYRKATS LKELEQRAAM 180 APEAPQISAS PAMDSVSCSD QESSQKWTPP PVDDIVSPLE FETKEVGAAA DYCEEVEAEP 240 TPSTIESAAQ PADRLVRPTG LAELEVPKYS GLEWMQDPFL TQLRSPWMEQ WSPYYASVLL 300 TSTTSLKELE QRAATAPEAP QISASPAMDS VSCSDQESSQ KWTPPPVDDI VSPLEFETKE 360 VGAAADYCEE VEAEPTPSTI ESAAQPADRL VRPTGLAELE VPKYSGLEWM QDPFLTQLRS 420 PWMEQWSPYY ASEMLLCTPR FLLLRHRKGR THSCPMG* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 6e-48 | 1 | 169 | 1 | 170 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020079832.1 | 0.0 | putative NAC domain-containing protein 94 | ||||
Swissprot | Q10S65 | 1e-102 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A199W6F8 | 0.0 | A0A199W6F8_ANACO; Putative NAC domain-containing protein 94 (Fragment) | ||||
STRING | XP_008781351.1 | 1e-118 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1770 | 38 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 2e-85 | NAC domain containing protein 36 |
Link Out ? help Back to Top | |
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Phytozome | Aco013059.1 |
Publications ? help Back to Top | |||
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