PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco013059.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

NAC

Protein Properties

Length: 458aa MW: 51285.8 Da PI: 4.6988

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco013059.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	153.8	7.6e-48	15	141	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 pGfrFhPt+eel+++yL++ v+gkkl++ +vi++v++y+++PwdLp+ +k +e+ewyf+++rd+++a+g r++r+t++g+Wkatg+d+++ s+ ++ Aco013059.1 15 PGFRFHPTEEELLDFYLRRAVNGKKLHF-DVIATVHLYRYNPWDLPSLAKIGEREWYFYVPRDRRQANGGRPSRTTERGFWKATGSDRPIRSAadPKR 111 9***********************99.99***********8888899**********************************9877778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 l+glkktLv+y+grap+g+ktdWvm+eyrl Aco013059.1 112 LIGLKKTLVYYQGRAPRGTKTDWVMNEYRL 141 8*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.88E-55	12	167	IPR003441	NAC domain
PROSITE profile	PS51005	54.849	13	167	IPR003441	NAC domain
Pfam	PF02365	2.0E-23	15	141	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence Send to blast
MEMQRSSGTA EVELPGFRFH PTEEELLDFY LRRAVNGKKL HFDVIATVHL YRYNPWDLPS 60 LAKIGEREWY FYVPRDRRQA NGGRPSRTTE RGFWKATGSD RPIRSAADPK RLIGLKKTLV 120 YYQGRAPRGT KTDWVMNEYR LPDANGAAAS AAAPPQEDIV LCKIYRKATS LKELEQRAAM 180 APEAPQISAS PAMDSVSCSD QESSQKWTPP PVDDIVSPLE FETKEVGAAA DYCEEVEAEP 240 TPSTIESAAQ PADRLVRPTG LAELEVPKYS GLEWMQDPFL TQLRSPWMEQ WSPYYASVLL 300 TSTTSLKELE QRAATAPEAP QISASPAMDS VSCSDQESSQ KWTPPPVDDI VSPLEFETKE 360 VGAAADYCEE VEAEPTPSTI ESAAQPADRL VRPTGLAELE VPKYSGLEWM QDPFLTQLRS 420 PWMEQWSPYY ASEMLLCTPR FLLLRHRKGR THSCPMG*

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence Send to blast

MEMQRSSGTA EVELPGFRFH PTEEELLDFY LRRAVNGKKL HFDVIATVHL YRYNPWDLPS  60
LAKIGEREWY FYVPRDRRQA NGGRPSRTTE RGFWKATGSD RPIRSAADPK RLIGLKKTLV  120
YYQGRAPRGT KTDWVMNEYR LPDANGAAAS AAAPPQEDIV LCKIYRKATS LKELEQRAAM  180
APEAPQISAS PAMDSVSCSD QESSQKWTPP PVDDIVSPLE FETKEVGAAA DYCEEVEAEP  240
TPSTIESAAQ PADRLVRPTG LAELEVPKYS GLEWMQDPFL TQLRSPWMEQ WSPYYASVLL  300
TSTTSLKELE QRAATAPEAP QISASPAMDS VSCSDQESSQ KWTPPPVDDI VSPLEFETKE  360
VGAAADYCEE VEAEPTPSTI ESAAQPADRL VRPTGLAELE VPKYSGLEWM QDPFLTQLRS  420
PWMEQWSPYY ASEMLLCTPR FLLLRHRKGR THSCPMG*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	6e-48	1	169	1	170	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020079832.1	0.0	putative NAC domain-containing protein 94
Swissprot	Q10S65	1e-102	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A199W6F8	0.0	A0A199W6F8_ANACO; Putative NAC domain-containing protein 94 (Fragment)
STRING	XP_008781351.1	1e-118	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1770	38	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	2e-85	NAC domain containing protein 36

Link Out ? help Back to Top
Phytozome	Aco013059.1

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]