PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco010929.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family C2H2
Protein Properties Length: 268aa    MW: 29762.3 Da    PI: 8.6909
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco010929.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000133759223
                 EETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2  2 kCpdCgksFsrksnLkrHirt.H 23
                 +Cp+Cg+ F  + +L +H+ + H
  Aco010929.1 37 PCPHCGEIFMKPQSLDTHQALtH 59
                 6******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.0993664IPR007087Zinc finger, C2H2
PROSITE patternPS0002803859IPR007087Zinc finger, C2H2
SuperFamilySSF563991.53E-1661266No hitNo description
Gene3DG3DSA:3.90.228.103.9E-1062266IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MHHLRKLSGC YYDQRHAVVG PFSWVSRDPS LRATVSPCPH CGEIFMKPQS LDTHQALTHA  60
VSELGPEDTS RNIVEIIFHS SWLKKHAQPP VCRIDKVLKI HNTSKTTAKF EDYRETIKTK  120
ANKLPKMYPR CIADGNELLR FHCTTIACSL GLDRSAVLCL NPKCKLCRII RGGFAPDSLG  180
RITTTASSGR ADETVRRMSS DGERRAMLVC RVIAGRVKKS CEYDCQEECD SVVSSRSSVG  240
AYSNLDELLL VFNPSAILPC FVVIYSG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020099631.10.0uncharacterized protein LOC109718047 isoform X1
TrEMBLA0A199UFI50.0A0A199UFI5_ANACO; Uncharacterized protein
STRINGXP_008781482.11e-111(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26333880
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-76C2H2-like zinc finger protein