PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco010558.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family NAC
Protein Properties Length: 716aa    MW: 79770.3 Da    PI: 4.6471
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco010558.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.37.3e-5491391128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                  lp GfrFhPtdeelv++yLk+k++g+   + evi+e+d++k+ePwdLp k  +k++++ew+fF+++d+ky++g+r+nrat++gyWkatgkd+++ sk 
  Aco010558.1   9 LPLGFRFHPTDEELVNHYLKRKITGRIRAEIEVIPEIDVCKCEPWDLPdKsLIKSDDREWFFFAPKDRKYPNGQRSNRATEAGYWKATGKDRTIRSKk 106
                  699***********************9777799**************96347888999*************************************985 PP

          NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  + +++g+kktLvf+kgrapkge+t+W+mheyr 
  Aco010558.1 107 NPATIGMKKTLVFHKGRAPKGERTQWIMHEYRT 139
                  6678***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.97E-594160IPR003441NAC domain
PROSITE profilePS5100558.4329160IPR003441NAC domain
PfamPF023654.6E-2810138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 716 aa     Download sequence    Send to blast
MTVVPLESLP LGFRFHPTDE ELVNHYLKRK ITGRIRAEIE VIPEIDVCKC EPWDLPDKSL  60
IKSDDREWFF FAPKDRKYPN GQRSNRATEA GYWKATGKDR TIRSKKNPAT IGMKKTLVFH  120
KGRAPKGERT QWIMHEYRTT EPEYESGDQG GFVLYRLFNK QEEKSPSSNA DEVERSGFSP  180
TPSRSSPGDT QHDADAMEET ANTSNKESPA SDLQEDPLSI PNSVENQPAG IKRWLADKAD  240
CSTAYTVKAD ENFHNINPEN CVGEARAKAD PLHNSFAQIS EQQNEKIDPN EFPNISSPML  300
PYTDHRFFGN INQEPDMGFN SDNIQNDEMN ELLIQLLSGP DEYPFAATDF PKDSVAETAP  360
QHIICDAASW KDSGASSDLE MEGGINQGAS VDTSDLFNAA YLQELQMDAC DEMNLSALYE  420
NASLLPYTST QDVYSVDSTA ESLQEMYHSV EESSNPNNIM GGGGNLTSSG IRIIARQSQQ  480
PVDPNFVFQQ QGTANRRILL QNSIQNPLYP KADSETSCTK QDCEERETIS KPVKESSVEE  540
TSTAEKDIPT TGITIRARQP RHSLNSNNVV TQQGTAVRRL RLQCKLQAGP SFCTDNESSR  600
TKEDGHQNKV AETEVMEHVD ENTPNTSDVP GVDLVDKLAE LSVHDADDTP QPLKTYQEAK  660
PNLRLRAKRT GEHENEVQGP ISPKRAPGSI IYVTCLVLSM FLLLLCVGIW KSLHS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-46816314171Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020091918.10.0NAC domain-containing protein 14-like
TrEMBLA0A199UPF20.0A0A199UPF2_ANACO; NAC domain-containing protein 14 (Fragment)
TrEMBLA0A2H3XUF40.0A0A2H3XUF4_PHODC; protein NTM1-like 9 isoform X1
STRINGXP_008788721.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51723859
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.29e-80NAC 014