PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aco009782.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family | BES1 | ||||||||
Protein Properties | Length: 76aa MW: 8818.06 Da PI: 8.5047 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 137.1 | 1.8e-42 | 3 | 75 | 2 | 74 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgsk 74 s r+pt++ErEnn RERrRR ++a+i+aGLRa+Gny+lpk+aD+neVlkALc eAGw ve+DGt+y k +k Aco009782.1 3 VSLRRPTERERENNCERERRRRMVTARIFAGLRAHGNYCLPKHADQNEVLKALCDEAGWHVEEDGTVYCKICK 75 588*****************************************************************99876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.7E-37 | 5 | 75 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 76 aa Download sequence Send to blast |
MTVSLRRPTE RERENNCERE RRRRMVTARI FAGLRAHGNY CLPKHADQNE VLKALCDEAG 60 WHVEEDGTVY CKICK* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 2e-18 | 26 | 75 | 392 | 441 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 2e-18 | 26 | 75 | 392 | 441 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 2e-18 | 26 | 75 | 392 | 441 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 2e-18 | 26 | 75 | 392 | 441 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006829668.1 | 8e-32 | protein BZR1 homolog 3 | ||||
Swissprot | Q6EUF1 | 6e-20 | BZR4_ORYSJ; Protein BZR1 homolog 4 | ||||
TrEMBL | A0A199VKG4 | 6e-31 | A0A199VKG4_ANACO; Protein BRASSINAZOLE-RESISTANT 2 | ||||
TrEMBL | W1NQJ5 | 2e-30 | W1NQJ5_AMBTC; Uncharacterized protein | ||||
STRING | ERM97084 | 3e-31 | (Amborella trichopoda) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13201 | 30 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75080.2 | 8e-21 | BES1 family protein |
Link Out ? help Back to Top | |
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Phytozome | Aco009782.1 |