PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco007761.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family Trihelix
Protein Properties Length: 560aa    MW: 60949.8 Da    PI: 5.4036
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco007761.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix681.9e-21115243186
     trihelix   1 rWtkqevlaLiearremeerlrrgk..........................................lkkplWeevskkmrergferspkqCkekwen 56 
                  +Wt+++v++Li ++ +++++ + g+                                          +kk++W++vs++m+e+gf +sp+qC++k+++
  Aco007761.1 115 KWTDSMVRLLISVVYSVGDDGGGGEggdhnniqlpppassssssrgantrgggaasasasasqqqqqQKKGKWKSVSRAMMEKGFCVSPQQCEDKFND 212
                  6888888888888885555555544445555555555555566666666666666666666666666******************************* PP

     trihelix  57 lnkrykkikegekkr.tsessstcpyfdqle 86 
                  lnkryk++ +  +k+ +++++++ +++d ++
  Aco007761.1 213 LNKRYKRVIDLLGKGtACRVVENPSLLDTMD 243
                  ***************55***********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138377.2E-16178269No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 560 aa     Download sequence    Send to blast
MGGGGMLPRS IGGAAGMLGL EMPLLNAHPQ QQQQQQQYVS PFQQPQNQQL AGHHSSLRQS  60
SYASYGVRGR QQQAQHSPEG EPEFREGGGA GDHGAAKRGG ASLTSQSPCP WTRMKWTDSM  120
VRLLISVVYS VGDDGGGGEG GDHNNIQLPP PASSSSSSRG ANTRGGGAAS ASASASQQQQ  180
QQKKGKWKSV SRAMMEKGFC VSPQQCEDKF NDLNKRYKRV IDLLGKGTAC RVVENPSLLD  240
TMDHLPAKAR EEARKLLSSK HLFFPEMCAY HNAGSANPSC AAGPPAAPAA QPSRMPSLPQ  300
LSDRQTSCFH HPAGPGASRE EEAIGKAAAA GANDGRHHQP AEEDEDEDEG EDNDADEDRS  360
NNEEEEEEDE EEEDDDDRLA DDDPLEDDRN EEDRGGDVED MKAVVTASKR QKRTPRLSLS  420
LQSSTTASAR LQELRSELMG MAAAAAAAGE GGGGAMMQWV RRRAAELEEQ RVGYQCRAFQ  480
LERQRFKWLR FSTNKEHEME RMKLDNDRLR LDNDRMLLLL RQKELELLST TASDAAGGHA  540
AAASSTDHHH FLNHHKQQE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020111158.10.0ankyrin repeat and KH domain-containing protein mask-like
TrEMBLA0A199W1H50.0A0A199W1H5_ANACO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP119443138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10040.11e-43sequence-specific DNA binding transcription factors