PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco005593.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

BES1

Protein Properties

Length: 328aa MW: 34950.8 Da PI: 8.2589

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco005593.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	206.5	7.3e-64	2	150	1	150
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaags...sasaspesslq 95 +++gr+ptw+ErEnnkrRERrRRaiaaki+aGLRa+Gnyklpk++DnneVlkALc+eAGwvve+DGttyrkg++p e+ +++gs sas sp+ss+q Aco005593.1 2 TSGGRMPTWRERENNKRRERRRRAIAAKIFAGLRAYGNYKLPKHCDNNEVLKALCHEAGWVVEEDGTTYRKGCRPAERVDVVGSvaaSASPSPCSSYQ 99 589***********************************************************************8888887611144466666666 PP DUF822 96 sslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvsssl 150 +sp+ sy++sp sss+psp+s++ i++ ++ + llp+l++ls++sss+ Aco005593.1 100 --------PSPCMSYNPSPPSSSIPSPTSSSYITNPNSgtdcNPLLPWLKTLSSASSSA 150 ........********************999888999999******9977764 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	2.9E-64	3	144	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence Send to blast
MTSGGRMPTW RERENNKRRE RRRRAIAAKI FAGLRAYGNY KLPKHCDNNE VLKALCHEAG 60 WVVEEDGTTY RKGCRPAERV DVVGSVAASA SPSPCSSYQP SPCMSYNPSP PSSSIPSPTS 120 SSYITNPNSG TDCNPLLPWL KTLSSASSSA SSSKLHLNIH CGSISAPVTP PLSSPTARTP 180 RIRTDWDDRT ARLPQWANGT GTPYTLLLSS TPPSPGRQVS PDAAWLTSSP SSPTFTLVSA 240 NPFGIYKEAS ASAAGSSRMW TPGQSGTCSP VPGDARDIHM SDCASDEFAF GSGSINGNVV 300 KPWEGETIHE ECGSDELELT LGSSRTR*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-24	6	76	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-24	6	76	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-24	6	76	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-24	6	76	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020098786.1	0.0	protein BZR1 homolog 2-like
Swissprot	Q5Z9E5	1e-109	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A199VP94	0.0	A0A199VP94_ANACO; Protein BZR 3
STRING	XP_008796066.1	1e-131	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	3e-78	BES1/BZR1 homolog 4

Link Out ? help Back to Top
Phytozome	Aco005593.1

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]