PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aco003778.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family | BES1 | ||||||||
Protein Properties | Length: 229aa MW: 23844.9 Da PI: 10.6219 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 143.2 | 2.3e-44 | 3 | 114 | 1 | 107 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpk.raDnneVlkALcreAGwvvedDGttyr..kgskpl.eeaeaagssas.aspess 93 gg+gr tw+ErEnnkrRERrRRaiaaki+aGLRa+G y+lp+ ++Dnne lkALcr+AGw+v dDGtt+r +g++p+ +++a + + pe++ Aco003778.1 3 GGGGRVATWRERENNKRRERRRRAIAAKIFAGLRAHGSYALPAnHSDNNELLKALCRQAGWTVLDDGTTFRttNGCEPPpPPEQIAATAPPpTRPENP 100 689***************************************669**************************9899***96444444444333777777 PP DUF822 94 lqsslkssalaspv 107 ss+++ a+ p Aco003778.1 101 NPSSVVNPAFLLPF 114 77888887776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 4.2E-41 | 4 | 116 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MRGGGGRVAT WRERENNKRR ERRRRAIAAK IFAGLRAHGS YALPANHSDN NELLKALCRQ 60 AGWTVLDDGT TFRTTNGCEP PPPPEQIAAT APPPTRPENP NPSSVVNPAF LLPFLRNLSS 120 LPPLRISSSA PATPPLSSPT AAAAARAPPA AAAPGATSPT PPPLWGGALS TAPASPTFNL 180 VHTAPAVGVG ELERGEGRVV KPWEGEKIHE VGVDELELTL GVGRNGGGG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 4e-15 | 10 | 82 | 375 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 4e-15 | 10 | 82 | 375 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 4e-15 | 10 | 82 | 375 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 4e-15 | 10 | 82 | 375 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010907212.1 | 9e-51 | protein BZR1 homolog 1 | ||||
Swissprot | Q94A43 | 1e-38 | BEH2_ARATH; BES1/BZR1 homolog protein 2 | ||||
TrEMBL | A0A199V353 | 2e-81 | A0A199V353_ANACO; Protein BZR 1 (Fragment) | ||||
STRING | XP_008795632.1 | 4e-48 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5474 | 34 | 53 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18890.1 | 2e-15 | BES1/BZR1 homolog 3 |
Link Out ? help Back to Top | |
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Phytozome | Aco003778.1 |