PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco003376.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 165aa    MW: 18210.7 Da    PI: 5.854
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco003376.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-19757155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++y+GVr +k +g+Wv+eIr+p   gk++r++lg+f +ae+Aa+a++ a+++l+g
  Aco003376.1  7 TQYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFESAEMAAAAHDVAALRLRG 57
                 58*****999.**********8...557*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.42E-22767No hitNo description
SMARTSM003801.5E-36871IPR001471AP2/ERF domain
SuperFamilySSF541713.73E-22866IPR016177DNA-binding domain
PROSITE profilePS5103223.63865IPR001471AP2/ERF domain
PfamPF008471.3E-12857IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.5E-32866IPR001471AP2/ERF domain
PRINTSPR003675.9E-13920IPR001471AP2/ERF domain
PRINTSPR003675.9E-134767IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
METQVATQYR GVRKRKWGKW VSEIREPGKK TRIWLGSFES AEMAAAAHDV AALRLRGREA  60
RLNFPEAADR LPRPKSSDPV DIRSAALEAA RRVRALGPEP CCSLSGPSRA GSEWEYIGND  120
ELGLDSPKMW AELAEAMLVA PPMWAHGDAD VEDWVQGSLW DALL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-17865260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A2e-17865563ATERF1
3gcc_A2e-17865563ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020107374.11e-115ethylene-responsive transcription factor ERF022
TrEMBLA0A199UGG81e-113A0A199UGG8_ANACO; Ethylene-responsive transcription factor ERF021
STRINGXP_008795312.11e-71(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22443389
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.15e-21ERF family protein