PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aco002220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family | BES1 | ||||||||
Protein Properties | Length: 132aa MW: 13493.1 Da PI: 9.3113 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 59.3 | 1.6e-18 | 19 | 60 | 34 | 75 |
DUF822 34 RaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskp 75 R +G+y+lp raD+n+Vl+AL++eAGw+v DGttyr ++ Aco002220.1 19 RGNGGYRLPPRADINDVLRALANEAGWIVLSDGTTYRSLPHH 60 778**********************************54444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 7.1E-17 | 19 | 62 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence Send to blast |
MRGMRRGRGG GGGWCRRGRG NGGYRLPPRA DINDVLRALA NEAGWIVLSD GTTYRSLPHH 60 LQCTTSYCAA AAPTSGHVIG GGAAPLLRPA DPATVGPAAD GGGGADADVA SYVQLLSVLG 120 DRSTVNRWIE P* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A199VWU0 | 1e-72 | A0A199VWU0_ANACO; Beta-amylase 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45300.2 | 8e-10 | beta-amylase 2 |
Link Out ? help Back to Top | |
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Phytozome | Aco002220.1 |