PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco002151.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

bHLH

Protein Properties

Length: 226aa MW: 24197.1 Da PI: 11.3436

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco002151.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.1	2e-05	79	111	5	39
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-ST CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKls 39 h +rEr RR+r+ ++++ L +l ++s ++ K s Aco002151.1 79 HMMRERWRRERMSQGYADLYAMLSSSS--KGDKIS 111 889********************9963..555554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.321	74	123	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	8.77E-10	75	143	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.6E-6	78	142	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence Send to blast
MLLHPRSAFS TYARVGSHDI GSLAAGRHVG SAAAVNVHRR LFGFIRRIGD GGVAAAGVRA 60 AAEAEDGVAG VGRSRGFQHM MRERWRRERM SQGYADLYAM LSSSSKGDKI SVAKAAAARV 120 RELKYQKEQL QRRNAELAVV VAAQRPATAA VAINLTIANC STPMAMDALT AALQCLKLME 180 LKITAVRSSF SGKNLSVIVG AETKVRSHVI FVHVRLIGYV HACLK*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5940	34	50

Link Out ? help Back to Top
Phytozome	Aco002151.1