PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn376681

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

FAR1

Protein Properties

Length: 342aa MW: 39296.7 Da PI: 9.136

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn376681	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.5	7.6e-07	36	90	2	48
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........t 48 +Y +++ke GF v k++skk ++g ++ ++Cs+ gk+++++ + + Achn376681 36 YYTRFSKEKGFAVAKRSSKKG-KDGMLKHVILQCSRDGKPRPREATlqyenaltqK 90 8************999887.8888**************99985554444330 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence Send to blast
MKDCVDGKEV NGDFEERVDE PKMGMEFDTH DEAYLYYTRF SKEKGFAVAK RSSKKGKDGM 60 LKHVILQCSR DGKPRPREAT LQYENALTQK VEIEKLADMQ SWYSFISCMT NDDLEKQFQS 120 AYTNDKFAHF HEKFLGKMAC SLGGFQVGHV WMEYEVNESI TIGKGEEVQQ KGIHKVPDKH 180 VLKRWCKNVK RVYTKIRISH DKSSTCIQTR RHDNVCNLYK EIADLVEHNQ ERYDIVMAQG 240 REMKRKVIED LNACASSRVD DTGTPVDYFS HGDGLIPSNQ NINILDPERV TRKGRPPYKR 300 KQGASEKAVK KKRATKKTCC TVLASQYGHL KTFLDQNSSL K*

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence Send to blast

MKDCVDGKEV NGDFEERVDE PKMGMEFDTH DEAYLYYTRF SKEKGFAVAK RSSKKGKDGM  60
LKHVILQCSR DGKPRPREAT LQYENALTQK VEIEKLADMQ SWYSFISCMT NDDLEKQFQS  120
AYTNDKFAHF HEKFLGKMAC SLGGFQVGHV WMEYEVNESI TIGKGEEVQQ KGIHKVPDKH  180
VLKRWCKNVK RVYTKIRISH DKSSTCIQTR RHDNVCNLYK EIADLVEHNQ ERYDIVMAQG  240
REMKRKVIED LNACASSRVD DTGTPVDYFS HGDGLIPSNQ NINILDPERV TRKGRPPYKR  300
KQGASEKAVK KKRATKKTCC TVLASQYGHL KTFLDQNSSL K*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	49	57	KRSSKKGKD
2	298	312	KRKQGASEKAVKKKR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6P579	9e-63	A0A2R6P579_ACTCH; Protein FAR1-RELATED SEQUENCE like

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	2e-06	FAR1 family protein