PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn374131 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | ERF | ||||||||
Protein Properties | Length: 308aa MW: 34671.4 Da PI: 4.4353 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.6 | 2.3e-16 | 107 | 154 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkl 53 y+G+r++k +g+W+AeIrd + ++kr +lg++ +ae+A ka+ + ++++ Achn374131 107 PYPGIRQRK-WGKWAAEIRDpF----QCKRLWLGTYNSAEDALKAYNNKKLEF 154 599*****9.**********55....27******************9988876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 1.1E-13 | 107 | 168 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.808 | 107 | 168 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.0E-8 | 108 | 152 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.05E-14 | 108 | 156 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 8.2E-19 | 108 | 157 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.54E-18 | 108 | 160 | No hit | No description |
PRINTS | PR00367 | 1.1E-7 | 108 | 119 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-7 | 130 | 146 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence Send to blast |
MPEPQVQSPT NQNLSKRPKN KSVSAGENFK PRKIRVICSD PYATDSSDDE LTEKPYGPKR 60 IVQEITLRDL GRTKTPETYS SCDDSNINGE KAPTRKRKRV LSRTQNPYPG IRQRKWGKWA 120 AEIRDPFQCK RLWLGTYNSA EDALKAYNNK KLEFKARATV SDKSLNRSSM TESNPEDNHP 180 AVSEDSVSLL PHKSPSSVLE LDSPATTSLI NAEKYSETVK DFGVETNFDE NEVPIVEEPL 240 GLDLGVELDL DSMFMDDFGL LLDDFCSLDD FQIHGFDDNQ PTDLPDFDFD LGNEELSCWI 300 DEPPNIA* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028083481.1 | 3e-89 | ethylene-responsive transcription factor ERF118-like | ||||
TrEMBL | A0A2R6PH08 | 0.0 | A0A2R6PH08_ACTCH; Ethylene-responsive transcription factor | ||||
STRING | VIT_01s0011g03470.t01 | 9e-75 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2957 | 23 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 9e-29 | ERF family protein |